Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq11651 149 7e-31 seq7454 149 7e-31 >seq11651 Length=16128 Score = 149 bits (164), Expect = 7e-31 Identities = 406/622 (65%), Gaps = 0/622 (0%) Strand=Plus/Plus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 |||| | ||| ||||||||||| || | |||||||| || || | ||| ||||||| Sbjct 4653 ACATCAGGCAGGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGA 4712 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | ||||| | || || || ||||| ||||| || | | || || || || Sbjct 4713 AGGTCAGGCCTGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGC 4772 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || || || || || ||||| || ||||| | || ||| | || | || | Sbjct 4773 TGAAGAAGATGCCCTCAACAGCTGCGAAGGCCACCACGCGCTCGCCGAAGGTGGCCCGCT 4832 Query 93264 TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGA 93323 | | |||||| || | ||||| || || |||| | || || || |||| Sbjct 4833 TGTGGGAGATCCAGTTGAGCGCCCAGTCTGCCTTTTGGCGCACCGGCGGCAGCGTCTCGA 4892 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 | ||||| || || || |||| | ||| || || | ||| | || || | ||| | Sbjct 4893 TGGCGTTGAACAGCAGGTCGCGCTGGGCCGGGTCCCGCACGTAGCTGTCAATCAGCAGCG 4952 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 | ||||| || || |||| ||||| || || ||||| |||||||| || || || | Sbjct 4953 AGTACATCTCCGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCT 5012 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 ||| ||||||||| || || | || | ||| || || || || || || || || || | Sbjct 5013 CCGGGATCTGCACCTCCTGGGCGAACCGCTCAACCAGGTTCTCGTTCACGATGCCGTCAG 5072 Query 93504 ATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTAT 93563 | || || || || |||| | | | | ||| || |||| | ||| | |||| | Sbjct 5073 AGGCAGCGAAGAAGGCCAGCACGTACGAGACAAAGTGCCTCTCGTTGTCTGTGAGCTGCT 5132 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || || || || || || || || || || ||||| || || | | Sbjct 5133 TCCAGTCCTCCAGGTCCTTGCTGAGGTCCACCTCCTCCACTGTCCAGAAGCTGGCCACCG 5192 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAG 93683 | || |||||||| | ||| ||||| || || || || || | || || || || | | Sbjct 5193 CCTTCTTGTACATCTGCCAGATGTCGTGGTACTGGATGGGCATAATCACGAAGCGGTGCG 5252 Query 93684 GGTTATCTTTTAGTAACGGCTC 93705 |||| || || || | |||||| Sbjct 5253 GGTTCTCCTTCAGCAGCGGCTC 5274 Score = 138 bits (152), Expect = 1e-27 Identities = 407/625 (65%), Gaps = 3/625 (0%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 |||| | ||| ||||||||||| || | |||||||| || || | ||| ||||||| Sbjct 11464 ACATCAGGCAGGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGA 11405 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | ||||| | || || || ||||| ||||| || | | || || || || Sbjct 11404 AGGTCAGGCCTGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGC 11345 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || || || || || ||||| || ||||| | || ||| | || | || | Sbjct 11344 TGAAGAAGATGCCCTCAACAGCTGCGAAGGCCACCACGCGCTCGCCGAAGGTGGCCCGCT 11285 Query 93264 TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGA 93323 | | |||||| || | ||||| || || |||| | || || || |||| Sbjct 11284 TGTGGGAGATCCAGTTGAGCGCCCAGTCTGCCTTTTGGCGCACCGGCGGCAGCGTCTCGA 11225 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAAT-CTCGTATGTATGTATCGATTAACAGA 93382 | ||||| || || || |||| | ||| | | || | ||| | || || | ||| Sbjct 11224 TGGCGTTGAACAGCAGGTCGCGCTGGGCCGGGTCCCCGCACGTAGCTGTCAATCAGCAGC 11165 Query 93383 GAATACATTTC--AGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 || ||||| || ||| |||| ||||| || || ||||| |||||||| || || | Sbjct 11164 GAGTACATCTCCGAGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCTGG 11105 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | |||| ||||||||| || || | || | ||| || || || || || || || || | Sbjct 11104 CCTCCGGGATCTGCACCTCCTGGGCGAACCGCTCAACCAGGTTCTCGTTCACGATGCCGT 11045 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT 93560 | || || || || || |||| | | | | ||| || |||| | ||| | |||| Sbjct 11044 CAGAGGCAGCGAAGAAGGCCAGCACGTACGAGACAAAGTGCCTCTCGTTGTCTGTGAGCT 10985 Query 93561 TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620 | ||| || || || || || || || || || || ||||| || || Sbjct 10984 GCTTCCAGTCCTCCAGGTCCTTGCTGAGGTCCACCTCCTCCACTGTCCAGAAGCTGGCCA 10925 Query 93621 CTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGAT 93680 | || || |||||||| | ||| ||||| || || || || || | || || || || | Sbjct 10924 CCGCCTTCTTGTACATCTGCCAGATGTCGTGGTACTGGATGGGCATAATCACGAAGCGGT 10865 Query 93681 TAGGGTTATCTTTTAGTAACGGCTC 93705 ||||| || || || | |||||| Sbjct 10864 GCGGGTTCTCCTTCAGCAGCGGCTC 10840 >seq7454 Length=56988 Score = 149 bits (164), Expect = 7e-31 Identities = 406/622 (65%), Gaps = 0/622 (0%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 |||| | ||| ||||||||||| || | |||||||| || || | ||| ||||||| Sbjct 38228 ACATCAGGCAGGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGA 38169 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | ||||| | || || || ||||| ||||| || | | || || || || Sbjct 38168 AGGTCAGGCCTGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGC 38109 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || || || || || ||||| || ||||| | || ||| | || | || | Sbjct 38108 TGAAGAAGATGCCCTCAACAGCTGCGAAGGCCACCACGCGCTCGCCGAAGGTGGCCCGCT 38049 Query 93264 TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGA 93323 | | |||||| || | ||||| || || |||| | || || || |||| Sbjct 38048 TGTGGGAGATCCAGTTGAGCGCCCAGTCTGCCTTTTGGCGCACCGGCGGCAGCGTCTCGA 37989 Query 93324 TAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 | ||||| || || || |||| | ||| || || | ||| | || || | ||| | Sbjct 37988 TGGCGTTGAACAGCAGGTCGCGCTGGGCCGGGTCCCGCACGTAGCTGTCAATCAGCAGCG 37929 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 | ||||| || || |||| ||||| || || ||||| |||||||| || || || | Sbjct 37928 AGTACATCTCCGAGTGGATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCACCTGGCCT 37869 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 ||| ||||||||| || || | || | ||| || || || || || || || || || | Sbjct 37868 CCGGGATCTGCACCTCCTGGGCGAACCGCTCAACCAGGTTCTCGTTCACGATGCCGTCAG 37809 Query 93504 ATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTAT 93563 | || || || || |||| | | | | ||| || |||| | ||| | |||| | Sbjct 37808 AGGCAGCGAAGAAGGCCAGCACGTACGAGACAAAGTGCCTCTCGTTGTCTGTGAGCTGCT 37749 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || || || || || || || || || || ||||| || || | | Sbjct 37748 TCCAGTCCTCCAGGTCCTTGCTGAGGTCCACCTCCTCCACTGTCCAGAAGCTGGCCACCG 37689 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAG 93683 | || |||||||| | ||| ||||| || || || || || | || || || || | | Sbjct 37688 CCTTCTTGTACATCTGCCAGATGTCGTGGTACTGGATGGGCATAATCACGAAGCGGTGCG 37629 Query 93684 GGTTATCTTTTAGTAACGGCTC 93705 |||| || || || | |||||| Sbjct 37628 GGTTCTCCTTCAGCAGCGGCTC 37607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556518511587760