Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4118 107 4e-18 seq6943 105 1e-17 seq4344 105 1e-17 seq895 105 1e-17 seq7494 104 5e-17 seq785 104 5e-17 seq45915 100 6e-16 seq16723 100 6e-16 seq15199 100 6e-16 seq13213 100 6e-16 seq9716 100 6e-16 seq3651 100 6e-16 seq2078 100 6e-16 seq1550 100 6e-16 seq714 100 6e-16 seq706 100 6e-16 seq613 100 6e-16 seq15675 93.3 9e-14 seq10447 93.3 9e-14 seq7351 91.5 3e-13 seq31767 84.2 4e-11 seq8944 84.2 4e-11 seq8097 84.2 4e-11 >seq4118 Length=99777 Score = 107 bits (118), Expect = 4e-18 Identities = 77/86 (90%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 142497 TGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGG 142556 ||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 34564 TGATATAGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGG 34623 Query 142557 TTCGAGCCCCACA-TCGGGCAGAAGT 142581 ||||||||||||| |||||| ||||| Sbjct 34624 TTCGAGCCCCACATTCGGGC-GAAGT 34648 >seq6943 Length=14264 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2129 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2188 Query 142563 CCCCACATCGGGC 142575 ||||||||||||| Sbjct 2189 CCCCACATCGGGC 2201 >seq4344 Length=12927 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2743 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2802 Query 142563 CCCCACATCGGGC 142575 ||||||||||||| Sbjct 2803 CCCCACATCGGGC 2815 >seq895 Length=190739 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 61004 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 61063 Query 142563 CCCCACATCGGGC 142575 ||||||||||||| Sbjct 61064 CCCCACATCGGGC 61076 >seq7494 Length=53801 Score = 104 bits (114), Expect = 5e-17 Identities = 71/79 (90%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 42952 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 42893 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||||| |||| ||||| Sbjct 42892 CCCCACATTGGGC-GAAGT 42875 >seq785 Length=214198 Score = 104 bits (114), Expect = 5e-17 Identities = 71/79 (90%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 37012 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 36953 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||||| |||| ||||| Sbjct 36952 CCCCACATTGGGC-GAAGT 36935 >seq45915 Length=153267 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 15765 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 15706 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 15705 CCCCACATTGGGC 15693 >seq16723 Length=16756 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1539 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1598 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 1599 CCCCACATTGGGC 1611 >seq15199 Length=18218 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 17881 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 17822 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 17821 CCCCACATTGGGC 17809 >seq13213 Length=24410 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 157 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 98 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 97 CCCCACATTGGGC 85 >seq9716 Length=9768 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 9492 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 9433 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 9432 CCCCACATTGGGC 9420 >seq3651 Length=85001 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 19434 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 19375 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 19374 CCCCACATTGGGC 19362 >seq2078 Length=144943 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 128013 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 128072 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 128073 CCCCACATTGGGC 128085 >seq1550 Length=196339 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 188315 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 188374 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 188375 CCCCACATTGGGC 188387 >seq714 Length=80081 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 32189 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 32130 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 32129 CCCCACATTGGGC 32117 >seq706 Length=47899 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 14087 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 14028 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 14027 CCCCACATTGGGC 14015 >seq613 Length=267015 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 116000 AGCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 115941 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 115940 CCCCACATTGGGC 115928 >seq15675 Length=25694 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 13472 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 13531 Query 142564 CCCACATCGGGCAGAAGT 142581 ||||||| |||| ||||| Sbjct 13532 CCCACATTGGGC-GAAGT 13548 >seq10447 Length=50893 Score = 93.3 bits (102), Expect = 9e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 34424 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 34483 Query 142564 CCCACATCGGGCAGAAGT 142581 ||||||| |||| ||||| Sbjct 34484 CCCACATTGGGC-GAAGT 34500 >seq7351 Length=63028 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/79 (89%), Gaps = 3/79 (4%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCT-AGTGGTCGTGGGTTCGAG 142562 ||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| Sbjct 54741 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGTG-TCGTGGGTTCGAG 54683 Query 142563 CCCCACATCGGGCAGAAGT 142581 |||||||| |||| ||||| Sbjct 54682 CCCCACATTGGGC-GAAGT 54665 >seq31767 Length=9268 Score = 84.2 bits (92), Expect = 4e-11 Identities = 66/77 (86%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGA-GCGCTAGACTCTT---AATCTAGTGGTCGTGGGTT 142558 |||||||||||||||||||||||| || |||||||| ||||| ||||||||||| Sbjct 5187 AGCCCGGTTAGCTCAGTCGGTAGAAGCATGAGACTCTTCTTAATCTCAGGGTCGTGGGTT 5128 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||||| |||| Sbjct 5127 CGAGCCCCACATTGGGC 5111 >seq8944 Length=48358 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108 ||||||| |||||||||||||| ||||||| ||||||||||||| |||||| |||||| Sbjct 15940 GCATGTCCTTGTGGCGCAATGGATAGCGCGTCGGACTTCTAATCCGGAGGTTGTGGGTTC 15999 Query 142109 GACCCCCGCCA 142119 || ||| ||| Sbjct 16000 GAGTCCCACCA 16010 >seq8097 Length=62427 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108 ||||||| |||||||||||||| ||||||| ||||||||||||| |||||| |||||| Sbjct 23457 GCATGTCCTTGTGGCGCAATGGATAGCGCGTCGGACTTCTAATCCGGAGGTTGTGGGTTC 23398 Query 142109 GACCCCCGCCA 142119 || ||| ||| Sbjct 23397 GAGTCCCACCA 23387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027189219775334