Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq10003 86.0 2e-13 seq6826 86.0 2e-13 seq4355 86.0 2e-13 seq3106 86.0 2e-13 >seq10003 Length=20107 Score = 86.0 bits (94), Expect = 2e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 3421 TGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| |||| |||| || ||||||||||||||||||| |||||||||||||||||| Sbjct 14587 TGCATCCTGCCGGTGAACATGATCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTC 14646 >seq6826 Length=19344 Score = 86.0 bits (94), Expect = 2e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 3421 TGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| |||| |||| || ||||||||||||||||||| |||||||||||||||||| Sbjct 1256 TGCATCCTGCCGGTGAACATGATCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTC 1315 >seq4355 Length=110499 Score = 86.0 bits (94), Expect = 2e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 3421 TGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| |||| |||| || ||||||||||||||||||| |||||||||||||||||| Sbjct 15322 TGCATCCTGCCGGTGAACATGATCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTC 15381 >seq3106 Length=111586 Score = 86.0 bits (94), Expect = 2e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 3421 TGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| |||| |||| || ||||||||||||||||||| |||||||||||||||||| Sbjct 37862 TGCATCCTGCCGGTGAACATGATCAACGAGAAGATCTACATCTTCCTCTGGTTCTGGTTC 37921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12473287749000