Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq11651 84.2 3e-11 seq7454 84.2 3e-11 >seq11651 Length=16128 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||||||||||| |||||||| ||||| || |||| |||||| |||||||| Sbjct 4372 GTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTGCCCTCCAGGCTGATGTTCTCCAT 4431 Query 125818 AAAATCAAATGGGTTCTTTGAGTT 125841 ||| || || || |||| ||||| Sbjct 4432 AAAGTCGAAGGGATTCTCAGAGTT 4455 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||||||||||| |||||||| ||||| || |||| |||||| |||||||| Sbjct 11743 GTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTGCCCTCCAGGCTGATGTTCTCCAT 11684 Query 125818 AAAATCAAATGGGTTCTTTGAGTT 125841 ||| || || || |||| ||||| Sbjct 11683 AAAGTCGAAGGGATTCTCAGAGTT 11660 >seq7454 Length=56988 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||||||||||| |||||||| ||||| || |||| |||||| |||||||| Sbjct 38506 GTACTCGCCCACCCGCTTCTCAAAGAAGTTGGTCTTGCCCTCCAGGCTGATGTTCTCCAT 38447 Query 125818 AAAATCAAATGGGTTCTTTGAGTT 125841 ||| || || || |||| ||||| Sbjct 38446 AAAGTCGAAGGGATTCTCAGAGTT 38423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596986421675920