Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq10723 131 7e-25 seq5687 131 7e-25 seq10836 127 8e-24 >seq10723 Length=45619 Score = 131 bits (144), Expect = 7e-25 Identities = 179/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||||||| | || |||||||||||||| || || | |||| || ||||| || ||| Sbjct 8722 ATTCAAGTTGAGTACAAAGGTGAAACTAAGACCTTCTTTGCTGAGGAGATTTCTTCCATG 8781 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | || || ||||| || || ||||| ||| | || | || |||||||| Sbjct 8782 GTCTTGACAAAGATGAAGGAGACTGCAGAGGCATACCTGGGAAAGACCGTCACTGATGCT 8841 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | ||||| || || || ||||||||| || || ||||| || || ||||| || Sbjct 8842 GTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGT 8901 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| ||||||| || || || || || || || ||||| ||||| | ||| Sbjct 8902 GCCATTGCTGGCCTAAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCA 8961 Query 451445 TATGGACTAG 451454 ||||| |||| Sbjct 8962 TATGGTCTAG 8971 >seq5687 Length=87099 Score = 131 bits (144), Expect = 7e-25 Identities = 179/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||||||| | || |||||||||||||||| || | ||||||| || || |||||| Sbjct 77759 ATTCAAGTTGAGTACAAAGGTGAAACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCTATG 77700 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | || || ||||| || || ||||| ||| | || | || |||||||| Sbjct 77699 GTCTTGACAAAGATGAAGGAGACTGCAGAGGCATACCTGGGAAAGACCGTCACTGATGCT 77640 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | ||||| || || || ||||||||| || || ||||| || || ||||| || Sbjct 77639 GTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGT 77580 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | ||||| || || || || || || || ||||| ||||| | ||| Sbjct 77579 GCCATTGCTGGCCTGAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCA 77520 Query 451445 TATGGACTAG 451454 ||||| |||| Sbjct 77519 TATGGTCTAG 77510 >seq10836 Length=45016 Score = 127 bits (140), Expect = 8e-24 Identities = 178/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||||||| | | |||||||||||||||| || | ||||||| || || || ||| Sbjct 26741 ATTCAAGTTGAGTTCAAAGGTGAAACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCCATG 26800 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | || || ||||| || || ||||| ||| | || | || |||||||| Sbjct 26801 GTCTTGACAAAGATGAAGGAGACTGCAGAGGCATACCTGGGAAAGACCGTCACTGATGCT 26860 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | ||||| || || || ||||||||| || || ||||| || || ||||| || Sbjct 26861 GTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGT 26920 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | ||||| || || || || ||||| || ||||| ||||| | ||| Sbjct 26921 GCCATTGCTGGCCTGAATGTGCTGCGCATCATCAATGAGCCCACAGCGGCTGCCATTGCA 26980 Query 451445 TATGGACTAG 451454 ||||| |||| Sbjct 26981 TATGGTCTAG 26990 Score = 127 bits (140), Expect = 8e-24 Identities = 178/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 451205 ATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||||||| | || |||||||||||||| || || | |||| || ||||| || ||| Sbjct 34877 ATTCAAGTTGAGTACAAAGGTGAAACTAAGACCTTCTTTGCTGAGGAGATTTCTTCCATG 34818 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || | || || ||||| || || ||||| ||| | || | || |||||||| Sbjct 34817 GTCTTGACAAAGATGAAGGAGACTGCAGAGGCATACCTGGGAAAGACCGTCACTGATGCT 34758 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | ||||| || || || ||||||||| || || ||||| || || ||||| || Sbjct 34757 GTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGT 34698 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | ||||| || || || || || || || ||||| ||||| | ||| Sbjct 34697 GCCATTGCTGGCCTGAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCA 34638 Query 451445 TATGGACTAG 451454 ||||| |||| Sbjct 34637 TATGGTCTAG 34628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974473614674792