Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11651 82.4 9e-11 seq7454 82.4 9e-11 seq2059 82.4 9e-11 seq1675 82.4 9e-11 >seq11651 Length=16128 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || ||| ||||||||| || |||||| || || Sbjct 4663 GGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGAAGGTCAGGCC 4722 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| |||| ||| || || || |||||||| Sbjct 4723 TGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGCTGAAGAAGAT 4782 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGT---CGA 119670 |||||| ||| ||||| || | | ||||| || ||||| | ||||| || Sbjct 4783 GCCCTCAACAGCTGCGAAGGCCACCACGCGCTC-GCCGAAGGTGGCCCGCTTGTGGGAGA 4841 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695 ||| ||||| ||||||| ||||| Sbjct 4842 TCCAGTTGAGCGCCCAGTCTGCCTT 4866 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || ||| ||||||||| || |||||| || || Sbjct 11454 GGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGAAGGTCAGGCC 11395 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| |||| ||| || || || |||||||| Sbjct 11394 TGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGCTGAAGAAGAT 11335 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGT---CGA 119670 |||||| ||| ||||| || | | ||||| || ||||| | ||||| || Sbjct 11334 GCCCTCAACAGCTGCGAAGGCCACCACGCGCTC-GCCGAAGGTGGCCCGCTTGTGGGAGA 11276 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695 ||| ||||| ||||||| ||||| Sbjct 11275 TCCAGTTGAGCGCCCAGTCTGCCTT 11251 >seq7454 Length=56988 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || ||||| || ||| ||||||||| || |||||| || || Sbjct 38218 GGCAAAGTCGGTGTGGAGGCCTTCGTCGCGACTGATGAGCTCGTTGCTGAAGGTCAGGCC 38159 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| |||| ||| || || || |||||||| Sbjct 38158 TGGCATGAGGCCGCGCTTCTTCAGCCAGAAGACGGCGGCGAAGCTGCCGCTGAAGAAGAT 38099 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGT---CGA 119670 |||||| ||| ||||| || | | ||||| || ||||| | ||||| || Sbjct 38098 GCCCTCAACAGCTGCGAAGGCCACCACGCGCTC-GCCGAAGGTGGCCCGCTTGTGGGAGA 38040 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695 ||| ||||| ||||||| ||||| Sbjct 38039 TCCAGTTGAGCGCCCAGTCTGCCTT 38015 >seq2059 Length=104123 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 110296 GCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAG 110355 || ||||||||||| | ||| ||| | | ||||||| | ||| ||||| |||| | Sbjct 72728 GCCAGATTGCACACTGCCACCTCATCTGGGCTGCTGTATTCGACAATCTCCGTGCACAGG 72787 Query 110356 TTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTA 110415 || || | ||| ||| || | || || ||| || ||||||||||| | ||||| Sbjct 72788 TTTGAGCACTTGATGGTGCCAAGGTGCTGCTGGTTGCTCTTGGAGTTGCACGAGTCCTTG 72847 Query 110416 TAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 || |||||||| || || ||||| || |||| | || || ||| || | ||| Sbjct 72848 TACAGCATGTAGGGCGTGCCAGTCTCGATCTGGGCCTCGATAATTGCGTACCA 72900 >seq1675 Length=86464 Score = 82.4 bits (90), Expect = 9e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 110296 GCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAG 110355 || ||||||||||| | ||| ||| | | ||||||| | ||| ||||| |||| | Sbjct 15271 GCCAGATTGCACACTGCCACCTCATCTGGGCTGCTGTATTCGACAATCTCCGTGCACAGG 15330 Query 110356 TTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTA 110415 || || | ||| ||| || | || || ||| || ||||||||||| | ||||| Sbjct 15331 TTTGAGCACTTGATGGTGCCAAGGTGCTGCTGGTTGCTCTTGGAGTTGCACGAGTCCTTG 15390 Query 110416 TAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 || |||||||| || || ||||| || |||| | || || ||| || | ||| Sbjct 15391 TACAGCATGTAGGGCGTGCCAGTCTCGATCTGGGCCTCGATAATTGCGTACCA 15443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588613971177200