Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6036 111 1e-18 seq10836 107 2e-17 seq5687 107 2e-17 seq10723 104 2e-16 >seq6036 Length=13239 Score = 111 bits (122), Expect = 1e-18 Identities = 262/393 (67%), Gaps = 2/393 (1%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| || || | |||||| | | ||| ||||||| ||| || ||| |||||| Sbjct 865 GATGCCAAGCGACTCATTGGACGCAAGTTTGATGATTCTGTTGTCCAACAAGACATGAAG 806 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 |||||||| ||| | | |||| | || | | ||| | ||| ||| | | || Sbjct 805 CATTGGCCCTTCACTGTCATCAATGATGCTAGCAGGCCTAAAATTCAAGTTGAGTACAAA 746 Query 550301 GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAA 550360 || |||| || | | ||| | || || |||||||| || | || ||||| Sbjct 745 GGTGAGACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCTATGGTCTTGACAAAGATGAAG 686 Query 550361 CAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGC 550419 | || || || | | ||| |||| || || ||||| || | ||||| || || Sbjct 685 GAGACTGC-AGAGGCATACCTGGGAAAGACCGTCACTGATGCTGTTGTCACTGTGCCTGC 627 Query 550420 ATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAA 550479 || || ||||| || |||||||| || || |||||||| |||||||| || || Sbjct 626 CTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCTGAA 567 Query 550480 TGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACA 550539 ||| || || || ||||| || || || |||||||| |||||||||| || || || | Sbjct 566 TGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAAGAA 507 Query 550540 TAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 | || || || ||||| ||||||||||| Sbjct 506 GAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 474 >seq10836 Length=45016 Score = 107 bits (118), Expect = 2e-17 Identities = 261/393 (66%), Gaps = 2/393 (1%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| || || | ||||| | | ||| ||||||| || || ||| |||||| Sbjct 34979 GATGCCAAGCGACTCATTGGGCGCAAGTTTGATGATTCTGTAGTCCAACAAGACATGAAG 34920 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 |||||||||||| | | |||| |||||| | ||| | ||| ||| | | || Sbjct 34919 CATTGGCCTTTCACTGTCATCAATGATTCTGGCAGGCCTAAGATTCAAGTTGAGTACAAA 34860 Query 550301 GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAA 550360 || ||| || | | || | ||||| || ||||| || | || ||||| Sbjct 34859 GGTGAAACTAAGACCTTCTTTGCTGAGGAGATTTCTTCCATGGTCTTGACAAAGATGAAG 34800 Query 550361 CAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGC 550419 | || || || | | ||| |||| || || ||||| || | ||||| || || Sbjct 34799 GAGACTGC-AGAGGCATACCTGGGAAAGACCGTCACTGATGCTGTTGTCACTGTGCCTGC 34741 Query 550420 ATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAA 550479 || || ||||| || |||||||| || || |||||||| |||||||| || || Sbjct 34740 CTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCTGAA 34681 Query 550480 TGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACA 550539 ||| || || || ||||| || || || |||||||| |||||||||| || || || | Sbjct 34680 TGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAAGAA 34621 Query 550540 TAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 | || || || ||||| ||||||||||| Sbjct 34620 GAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 34588 Score = 104 bits (114), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || || ||||| || | ||||| || || || || ||||| || |||||||| || Sbjct 26849 GTCACTGATGCTGTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACC 26908 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| |||||||| || ||||| || || || |||||||| || || || Sbjct 26909 AAGGATGCTGGTGCCATTGCTGGCCTGAATGTGCTGCGCATCATCAATGAGCCCACAGCG 26968 Query 550511 GCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTT 550570 ||||| |||||||||| || || || | | || || || ||||| ||||||||| Sbjct 26969 GCTGCCATTGCATATGGTCTAGACAAGAAGAGTGGCCACGAGAGGAATGTGCTCATCTTT 27028 Query 550571 GA 550572 || Sbjct 27029 GA 27030 Score = 91.5 bits (100), Expect = 1e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| ||| | || || || || ||||||||||| | || | ||||| Sbjct 26113 GCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAAG 26172 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| ||||| || ||| |||| ||||| |||||| | || || Sbjct 26173 GTTGAAATTATTGCCAACGATCAGGGCAACCGAACAACTCCCAGCTATGTTGCATTTACT 26232 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || ||| | | |||||| | || ||| |||| | | |||||| ||||| Sbjct 26233 GATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAAT 26292 Query 550172 ACTATTTTTG 550181 ||| | |||| Sbjct 26293 ACTGTGTTTG 26302 >seq5687 Length=87099 Score = 107 bits (118), Expect = 2e-17 Identities = 262/393 (67%), Gaps = 3/393 (1%) Strand=Plus/Minus Query 550181 GATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAG 550240 ||||| || || | ||||| |||||| | |||||| || || ||| |||||| Sbjct 77860 GATGCCAAGCGACTCATTGGCGCAAGTTTGA-TGATTCTGTAGTCCAACAAGACATGAAG 77802 Query 550241 CATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAA 550300 |||||||| ||| | | |||| | |||| | ||| | ||| ||| | | || Sbjct 77801 CATTGGCCCTTCACTGTCATCAATGATGCTGGCAGGCCTAAAATTCAAGTTGAGTACAAA 77742 Query 550301 GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAA 550360 || |||| || | | ||| | || || |||||||| || | || ||||| Sbjct 77741 GGTGAAACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCTATGGTCTTGACAAAGATGAAG 77682 Query 550361 CAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGC 550419 | || || || | | ||| |||| || || ||||| || | ||||| || || Sbjct 77681 GAGACTGC-AGAGGCATACCTGGGAAAGACCGTCACTGATGCTGTTGTCACTGTGCCTGC 77623 Query 550420 ATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAA 550479 || || ||||| || |||||||| || || |||||||| |||||||| || || Sbjct 77622 CTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCTGAA 77563 Query 550480 TGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACA 550539 ||| || || || ||||| || || || |||||||| |||||||||| || || || | Sbjct 77562 TGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAAGAA 77503 Query 550540 TAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 | || || || ||||| ||||||||||| Sbjct 77502 GAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 77470 Score = 104 bits (114), Expect = 2e-16 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 550325 GAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT 550384 ||| | || || |||||||| || | || ||||| | || || || | | ||| Sbjct 70296 GAAGAGATCTCTTCTATGGTCTTGACAAAGATGAAGGAGACTGC-AGAGGCATACCTGGG 70354 Query 550385 CAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| || || ||||| || | ||||| || || || || ||||| || ||||| Sbjct 70355 AAAGACCGTCACTGATGCTGTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCA 70414 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||| || || |||||||| |||||||| || ||||| || || || ||||| || || Sbjct 70415 AGCCACCAAGGATGCTGGTGCCATTGCTGGCCTGAATGTGCTGCGCATCATCAACGAGCC 70474 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACT 550563 || |||||||| |||||||||| || || || | | || || || ||||| || Sbjct 70475 CACAGCTGCTGCCATTGCATATGGTCTAGACAAGAAGAGTGGCCACGAGAGGAATGTGCT 70534 Query 550564 CATCTTTGA 550572 ||||||||| Sbjct 70535 CATCTTTGA 70543 Score = 91.5 bits (100), Expect = 1e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| ||| | || || || || ||||||||||| | || | ||||| Sbjct 69613 GCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAAG 69672 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| ||||| || ||| |||| ||||| |||||| | || || Sbjct 69673 GTTGAAATTATTGCCAACGATCAGGGCAACCGAACCACTCCCAGCTATGTTGCATTTACC 69732 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || ||| | | |||||| | || ||| |||| | | |||||| ||||| Sbjct 69733 GATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAAT 69792 Query 550172 ACTATTTTTG 550181 ||| | |||| Sbjct 69793 ACTGTGTTTG 69802 >seq10723 Length=45619 Score = 104 bits (114), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || || ||||| || | ||||| || || || || ||||| || |||||||| || Sbjct 8830 GTCACTGATGCTGTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCAAGCCACC 8889 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || |||||||| |||||||| || ||||| || || || ||||| || || || ||| Sbjct 8890 AAGGATGCTGGTGCCATTGCTGGCCTAAATGTGCTGCGCATCATCAACGAGCCCACAGCT 8949 Query 550511 GCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTT 550570 ||||| |||||||||| || || || | | || || || ||||| ||||||||| Sbjct 8950 GCTGCCATTGCATATGGTCTAGACAAGAAGAGTGGCCACGAGAGGAATGTGCTCATCTTT 9009 Query 550571 GA 550572 || Sbjct 9010 GA 9011 Score = 104 bits (114), Expect = 2e-16 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 550325 GAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT 550384 ||| | || || |||||||| || | || ||||| | || || || | | ||| Sbjct 19141 GAAGAGATCTCTTCTATGGTCTTGACAAAGATGAAGGAGACTGC-AGAGGCATACCTGGG 19083 Query 550385 CAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| || || ||||| || | ||||| || || || || ||||| || ||||| Sbjct 19082 AAAGACCGTCACTGATGCTGTTGTCACTGTGCCTGCCTACTTCAATGATAGTCAGCGTCA 19023 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||| || || |||||||| |||||||| || ||||| || || || ||||| || || Sbjct 19022 AGCCACCAAGGATGCTGGTGCCATTGCTGGCCTAAATGTGCTGCGCATCATCAACGAGCC 18963 Query 550504 TACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACT 550563 || |||||||| |||||||||| || || || | | || || || ||||| || Sbjct 18962 CACAGCTGCTGCCATTGCATATGGTCTAGACAAGAAGAGTGGCCACGAGAGGAATGTGCT 18903 Query 550564 CATCTTTGA 550572 ||||||||| Sbjct 18902 CATCTTTGA 18894 Score = 91.5 bits (100), Expect = 1e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| ||| | || || || || ||||||||||| | || | ||||| Sbjct 19678 GCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAAG 19619 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| ||||| || ||| |||| ||||| |||||| | || || Sbjct 19618 GTTGAAATTATTGCCAACGATCAGGGCAACCGAACCACTCCCAGCTATGTTGCATTTACC 19559 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || ||| | | |||||| | || ||| |||| | | |||||| ||||| Sbjct 19558 GATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAAT 19499 Query 550172 ACTATTTTTG 550181 ||| | |||| Sbjct 19498 ACTGTGTTTG 19489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026695457105260