Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq10836 131 1e-24 seq10723 127 1e-23 seq5687 127 1e-23 seq10232 89.7 3e-12 seq5620 89.7 3e-12 seq2451 89.7 3e-12 >seq10836 Length=45016 Score = 131 bits (144), Expect = 1e-24 Identities = 271/396 (68%), Gaps = 8/396 (2%) Strand=Plus/Plus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || || | ||||| || || ||||||||| | ||||||| || ||| Sbjct 26639 GATGCAAAGCGACTCATTGGACGCAAGTTTGATGATTCTGTTGTCCAACAAGACATGAAG 26698 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635 |||||||| || | || | |||| ||| || ||| | || ||| | | || Sbjct 26699 CATTGGCCCTTCACTGTTGTCAATGATGGCAGTCGGCCAAAAATTCAAGTTGAGTTCAA- 26757 Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695 ||||||||||||| || | | ||| | || ||||| ||||| || | || |||| Sbjct 26758 -AGGTGAAACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCCATGGTCTTGACAAAGATGA 26816 Query 474696 AACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTGTTCC 474753 | | || || ||| |||| || ||| |||| || |||||||| || | ||||| || Sbjct 26817 AGGAGACTGCAGAG-GCATACCTGGGA-AAGACCGTCACTGATGCTGTTGTCACTGTGCC 26874 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813 || || || |||||| ||| |||||||| || || ||||| || ||||| || || Sbjct 26875 TGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCT 26934 Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||||| | || || || ||||| || ||||| || || |||| |||||||| || || Sbjct 26935 GAATGTGCTGCGCATCATCAATGAGCCCACAGCGGCTGCCATTGCATATGGTCTAGACAA 26994 Query 474874 GAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 ||| || | | || ||||| | |||||||| Sbjct 26995 GAAGAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 27030 Score = 127 bits (140), Expect = 1e-23 Identities = 270/396 (68%), Gaps = 8/396 (2%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || || | ||||| || || ||||||||| | |||||| || ||| Sbjct 34979 GATGCCAAGCGACTCATTGGGCGCAAGTTTGATGATTCTGTAGTCCAACAAGACATGAAG 34920 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635 ||||||||||| | || || |||| | ||| | || | || ||| | |||| Sbjct 34919 CATTGGCCTTTCACTGTCATCAATGATTCTGGCAGGCCTAAGATTCAAGTTGAGTACAA- 34861 Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695 |||||||||||| || | | || | |||||||| ||||| || | || |||| Sbjct 34860 -AGGTGAAACTAAGACCTTCTTTGCTGAGGAGATTTCTTCCATGGTCTTGACAAAGATGA 34802 Query 474696 AACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTGTTCC 474753 | | || || ||| |||| || ||| |||| || |||||||| || | ||||| || Sbjct 34801 AGGAGACTGCAGAG-GCATACCTGGGA-AAGACCGTCACTGATGCTGTTGTCACTGTGCC 34744 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813 || || || |||||| ||| |||||||| || || ||||| || ||||| || || Sbjct 34743 TGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCT 34684 Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||||| | || || || || || || ||||| || || |||| |||||||| || || Sbjct 34683 GAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAA 34624 Query 474874 GAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 ||| || | | || ||||| | |||||||| Sbjct 34623 GAAGAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 34588 Score = 96.9 bits (106), Expect = 2e-14 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||||||||||||||| | || || || ||| ||||| | ||| | || | ||||| Sbjct 26112 TGCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAA 26171 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| |||||||| || || || || ||||||| || |||||| | ||||| Sbjct 26172 GGTTGAAATTATTGCCAACGATCAGGGCAACCGAACAACTCCCAGCTATGTTGCATTTAC 26231 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || ||| || || || ||| | |||||| |||| | || |||||| || Sbjct 26232 TGATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAA 26291 Query 474508 TACTATTTTTG 474518 |||| | |||| Sbjct 26292 TACTGTGTTTG 26302 >seq10723 Length=45619 Score = 127 bits (140), Expect = 1e-23 Identities = 270/396 (68%), Gaps = 8/396 (2%) Strand=Plus/Plus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || || | ||||| || || ||||||||| | || ||| || ||| Sbjct 8620 GATGCCAAGCGACTCATTGGGCGCAAGTTTGATGATTCTGTAGTACAACAAGACATGAAG 8679 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635 ||||||||||| | || || |||| || ||| | || | || ||| | |||| Sbjct 8680 CATTGGCCTTTCACTGTCATCAATGATGCTGGCAGGCCTAAGATTCAAGTTGAGTACAA- 8738 Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695 |||||||||||| || | | || | |||||||| ||||| || | || |||| Sbjct 8739 -AGGTGAAACTAAGACCTTCTTTGCTGAGGAGATTTCTTCCATGGTCTTGACAAAGATGA 8797 Query 474696 AACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTGTTCC 474753 | | || || ||| |||| || ||| |||| || |||||||| || | ||||| || Sbjct 8798 AGGAGACTGCAGAG-GCATACCTGGGA-AAGACCGTCACTGATGCTGTTGTCACTGTGCC 8855 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813 || || || |||||| ||| |||||||| || || ||||| || ||||| || || Sbjct 8856 TGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCT 8915 Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||||| | || || || || || || ||||| || || |||| |||||||| || || Sbjct 8916 AAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAA 8975 Query 474874 GAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 ||| || | | || ||||| | |||||||| Sbjct 8976 GAAGAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 9011 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||||||||||||||| | || || || ||| ||||| | ||| | || | ||||| Sbjct 19679 TGCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAA 19620 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| |||||||| || || || || |||| || || |||||| | ||||| Sbjct 19619 GGTTGAAATTATTGCCAACGATCAGGGCAACCGAACCACTCCCAGCTATGTTGCATTTAC 19560 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || ||| || || || ||| | |||||| |||| | || |||||| || Sbjct 19559 CGATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAA 19500 Query 474508 TACTATTTTTG 474518 |||| | |||| Sbjct 19499 TACTGTGTTTG 19489 >seq5687 Length=87099 Score = 127 bits (140), Expect = 1e-23 Identities = 271/396 (68%), Gaps = 9/396 (2%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || || | ||||| || || ||||||||| | |||||| || ||| Sbjct 77860 GATGCCAAGCGACTCATTGG-CGCAAGTTTGATGATTCTGTAGTCCAACAAGACATGAAG 77802 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AATACACG 474635 |||||||| || | || || |||| || ||| | || | || ||| | |||| Sbjct 77801 CATTGGCCCTTCACTGTCATCAATGATGCTGGCAGGCCTAAAATTCAAGTTGAGTACAA- 77743 Query 474636 CAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGA 474695 ||||||||||||| || | | ||| | || ||||| ||||| || | || |||| Sbjct 77742 -AGGTGAAACTAAAAGCTTCTTTGCTGAAGAGATCTCTTCTATGGTCTTGACAAAGATGA 77684 Query 474696 AACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTGTTCC 474753 | | || || ||| |||| || ||| |||| || |||||||| || | ||||| || Sbjct 77683 AGGAGACTGCAGAG-GCATACCTGGGA-AAGACCGTCACTGATGCTGTTGTCACTGTGCC 77626 Query 474754 AGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCT 474813 || || || |||||| ||| |||||||| || || ||||| || ||||| || || Sbjct 77625 TGCCTACTTCAATGATAGTCAGCGTCAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCT 77566 Query 474814 TAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA 474873 ||||| | || || || || || || ||||| || || |||| |||||||| || || Sbjct 77565 GAATGTGCTGCGCATCATCAACGAGCCCACAGCTGCTGCCATTGCATATGGTCTAGACAA 77506 Query 474874 GAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA 474909 ||| || | | || ||||| | |||||||| Sbjct 77505 GAAGAGTGGCCACGAGAGGAATGTGCTCATCTTTGA 77470 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||||||||||||||| | || || || ||| ||||| | ||| | || | ||||| Sbjct 69612 TGCAATTGGTATTGATCTGGGTACAACCTACTCGTGTGTTGGTGTCTTCCAGCACGGTAA 69671 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| |||||||| || || || || |||| || || |||||| | ||||| Sbjct 69672 GGTTGAAATTATTGCCAACGATCAGGGCAACCGAACCACTCCCAGCTATGTTGCATTTAC 69731 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || ||| || || || ||| | |||||| |||| | || |||||| || Sbjct 69732 CGATACCGAAAGGCTCATCGGTGATTCGGCTAAAAATCAGGTGGCGCTAAATCCTTCCAA 69791 Query 474508 TACTATTTTTG 474518 |||| | |||| Sbjct 69792 TACTGTGTTTG 69802 >seq10232 Length=31523 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| |||||| ||| || || || || || |||||||| || || || || Sbjct 29809 ATTGTAGTCAGATAGAGTCCTGCCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTG 29750 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || || || || || || |||||||| || ||||| |||||| || ||||| || Sbjct 29749 CTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTC 29690 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | |||||||| || || || || ||||| ||||| ||||||||||| Sbjct 29689 GCTAGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTG 29633 >seq5620 Length=52182 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| |||||| ||| || || || || || |||||||| || || || || Sbjct 11549 ATTGTAGTCAGATAGAGTCCTGCCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTG 11490 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || || || || || || |||||||| || ||||| |||||| || ||||| || Sbjct 11489 CTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTC 11430 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | |||||||| || || || || ||||| ||||| ||||||||||| Sbjct 11429 GCTAGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTG 11373 >seq2451 Length=180161 Score = 89.7 bits (98), Expect = 3e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| |||||| ||| || || || || || |||||||| || || || || Sbjct 141634 ATTGTAGTCAGATAGAGTCCTGCCGTCCTCCAGCTGTTTGCCAGCAAAGATCAGGCGCTG 141693 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || || || || || || |||||||| || ||||| |||||| || ||||| || Sbjct 141694 CTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATAGTGTC 141753 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | |||||||| || || || || ||||| ||||| ||||||||||| Sbjct 141754 GCTAGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAAATTTG 141810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266069888547752