Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1050 141 8e-29 seq721 141 8e-29 seq46304 138 9e-28 seq10730 134 1e-26 seq7463 131 1e-25 seq2636 102 7e-17 seq1807 100 2e-16 seq767 100 2e-16 seq20824 87.8 1e-12 seq45287 86.0 5e-12 >seq1050 Length=177667 Score = 141 bits (156), Expect = 8e-29 Identities = 183/250 (73%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGAC 34442 ||| ||||| ||| ||||||| || || || || | || || || || | |||| Sbjct 90156 CTGCAACTTCTCGGCATCGTGGGCCCCATTAACAATATAGCGATCATTCTTCTGGTCGAA 90097 Query 34443 CTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCC 34502 ||| || || |||||||||||| ||||| || || || || ||||| | ||| | | Sbjct 90096 CTGGGTCTGGGCGCCCAGCTCGGCGCCGAAATATTTAGTTGGATAAATTGGCGGCCTGCA 90037 Query 34503 AAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCC 34562 ||||| ||| | | ||| |||||||||| ||||||||||| ||||||||||| || || Sbjct 90036 GAGCGCTTTGCCAACCTCGTGCATGTTGACAATGACAGTCTTAATGCCGTTGCCTTTGCC 89977 Query 34563 TTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT-GC 34621 |||||| || || | ||| |||||||||||||| || || ||| ||| | || || Sbjct 89976 TTCGACTTTCGCAATCAGGCGGGGCATTTTGTAGCGATAAAAGTCGT-CGCTAATTTCGC 89918 Query 34622 GGTTAACGTT 34631 | || ||||| Sbjct 89917 GATTCACGTT 89908 >seq721 Length=222822 Score = 141 bits (156), Expect = 8e-29 Identities = 183/250 (73%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGAC 34442 ||| ||||| ||| ||||||| || || || || | || || || || | |||| Sbjct 8725 CTGCAACTTCTCGGCATCGTGGGCCCCATTAACAATATAGCGATCATTCTTCTGGTCGAA 8784 Query 34443 CTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCC 34502 ||| || || |||||||||||| ||||| || || || || ||||| | ||| | | Sbjct 8785 CTGGGTCTGGGCGCCCAGCTCGGCGCCGAAATATTTAGTTGGATAAATTGGCGGCCTGCA 8844 Query 34503 AAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCC 34562 ||||| ||| | | ||| |||||||||| ||||||||||| ||||||||||| || || Sbjct 8845 GAGCGCTTTGCCAACCTCGTGCATGTTGACAATGACAGTCTTAATGCCGTTGCCTTTGCC 8904 Query 34563 TTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT-GC 34621 |||||| || || | ||| |||||||||||||| || || ||| ||| | || || Sbjct 8905 TTCGACTTTCGCAATCAGGCGGGGCATTTTGTAGCGATAAAAGTCGT-CGCTAATTTCGC 8963 Query 34622 GGTTAACGTT 34631 | || ||||| Sbjct 8964 GATTCACGTT 8973 >seq46304 Length=107011 Score = 138 bits (152), Expect = 9e-28 Identities = 182/250 (73%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGAC 34442 ||| | ||| ||| ||||||| || || || || | || || || || | |||| Sbjct 59186 CTGCAGCTTCTCGGCATCGTGGGCCCCATTAACAATATAGCGATCATTCTTCTGGTCGAA 59245 Query 34443 CTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCC 34502 ||| || || |||||||||||| ||||| || || || || ||||| | ||| | | Sbjct 59246 CTGGGTCTGGGCGCCCAGCTCGGCGCCGAAATATTTAGTTGGATAAATTGGCGGCCTGCA 59305 Query 34503 AAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCC 34562 ||||| ||| | | ||| |||||||||| ||||||||||| ||||||||||| || || Sbjct 59306 GAGCGCTTTGCCAACCTCGTGCATGTTGACAATGACAGTCTTAATGCCGTTGCCTTTGCC 59365 Query 34563 TTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT-GC 34621 |||||| || || | ||| |||||||||||||| || || ||| ||| | || || Sbjct 59366 TTCGACTTTCGCAATCAGGCGGGGCATTTTGTAGCGATAAAAGTCGT-CGCTAATTTCGC 59424 Query 34622 GGTTAACGTT 34631 | || ||||| Sbjct 59425 GATTCACGTT 59434 >seq10730 Length=46315 Score = 134 bits (148), Expect = 1e-26 Identities = 199/282 (71%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 34355 ACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGA 34414 ||||||| |||||| |||| | | ||| ||||| || | ||||| | || || | Sbjct 5588 ACTTGCGTATGAAAGCATCCAAAATAGTCTGCAACTTGTCGCAATCGTGCGCCCCATTCA 5647 Query 34415 CGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGT 34474 | ||||| |||||||| || | |||| || | || ||||| || ||| || || Sbjct 5648 CTATGAACCGTTCGTTCTTCTGGTCGAATTGAATCTGGGCGCCAAGTTCGGCGCCAAAAA 5707 Query 34475 ACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGA 34534 | || || ||||| || | ||| || ||||| || ||||| | ||||||||||| || | Sbjct 5708 ATTTAGTTGGGTAGATTGGCGGCCGGCCAAGGGCTTTGGCAACCTCGGGCATGTTCACTA 5767 Query 34535 TGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGT 34594 | ||||| || |||||||| ||||| || ||||| ||||| | | ||||| |||| Sbjct 5768 TAACAGTTTTAATGCCGTTACCCTTGCCCTCGACTTTGGCAATCAGTCTGGGCATCTTGT 5827 Query 34595 AGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAG 34636 |||| ||||| |||| || | || || ||||||| || Sbjct 5828 AGCGATAGAAGTCGTCGCTAACCTCTCGATTCACGTTCAGAG 5869 >seq7463 Length=67126 Score = 131 bits (144), Expect = 1e-25 Identities = 198/282 (70%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 34355 ACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGA 34414 ||||||| |||||| |||| | | ||| ||||| || | ||||| | || || | Sbjct 46598 ACTTGCGTATGAAAGCATCCAAAATAGTCTGCAACTTGTCGCAATCGTGCGCCCCATTCA 46539 Query 34415 CGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGT 34474 | ||||| |||||||| || | |||| || | || ||||| || ||| || || Sbjct 46538 CTATGAACCGTTCGTTCTTCTGGTCGAATTGAATCTGGGCGCCAAGTTCGGCGCCAAAAA 46479 Query 34475 ACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGA 34534 | || || || || || | ||| || ||||| || ||||| | ||||||||||| || | Sbjct 46478 ATTTAGTTGGATAGATTGGCGGCCGGCCAAGGGCTTTGGCAACCTCGGGCATGTTCACTA 46419 Query 34535 TGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGT 34594 | ||||| || |||||||| ||||| || ||||| ||||| | | ||||| |||| Sbjct 46418 TAACAGTTTTAATGCCGTTACCCTTGCCCTCGACTTTGGCAATCAGTCTGGGCATCTTGT 46359 Query 34595 AGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAG 34636 |||| ||||| |||| || | || || ||||||| || Sbjct 46358 AGCGATAGAAGTCGTCGCTAACCTCTCGATTCACGTTCAGAG 46317 >seq2636 Length=142077 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 107163 TGCCGCACGGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTA 107222 || ||| ||| ||||||||| |||||||||||||||||||||| | |||||||| Sbjct 25775 TGGCGCCCGGCAAGCACGGCTTTCACGTGCACGAATTTGGCGACAATACGAACGGCTGCG 25716 Query 107223 CGTCCGCCGGTGAACACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAG 107282 ||| || || | || |||||||| | | | ||||| || || |||| || | Sbjct 25715 TGTCGGCTGGCGCTCATTTCAATCCGTGCAAACGGACCCACGGCGCTCCGGACGACGAGG 25656 Query 107283 AAAGGCACGTCGGCGATCTGGGCAACGTC 107311 | ||||||||||| ||||||||||||||| Sbjct 25655 AGAGGCACGTCGGGGATCTGGGCAACGTC 25627 >seq1807 Length=57471 Score = 100 bits (110), Expect = 2e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 107163 TGCCGCACGGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTA 107222 || ||| ||| ||||||||| |||||||||||||||||||||| | |||||||| Sbjct 44087 TGGCGCCCGGCAAGCACGGCTTTCACGTGCACGAATTTGGCGACAATACGAACGGCTGCG 44028 Query 107223 CGTCCGCCGGTGAACACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAG 107282 ||| || || | || |||||||| | | | ||||| || || |||| || | Sbjct 44027 TGTCGGCTGGCGCTCATTTCAATCCGTGCAAACGGACCCACGGCGCTCCGGACGACGAGG 43968 Query 107283 AAAGGCACGTCGGCGATCTGGGCAACGT 107310 | ||||||||||| |||||||||||||| Sbjct 43967 AGAGGCACGTCGGGGATCTGGGCAACGT 43940 >seq767 Length=230551 Score = 100 bits (110), Expect = 2e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 107163 TGCCGCACGGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTA 107222 || ||| ||| ||||||||| |||||||||||||||||||||| | |||||||| Sbjct 117581 TGGCGCCCGGCAAGCACGGCTTTCACGTGCACGAATTTGGCGACAATACGAACGGCTGCG 117522 Query 107223 CGTCCGCCGGTGAACACTTCAATCCCACATACCAAAATCACGGTGCGCCCGACGCCGTAG 107282 ||| || || | || |||||||| | | | ||||| || || |||| || | Sbjct 117521 TGTCGGCTGGCGCTCATTTCAATCCGTGCAAACGGACCCACGGCGCTCCGGACGACGAGG 117462 Query 107283 AAAGGCACGTCGGCGATCTGGGCAACGT 107310 | ||||||||||| |||||||||||||| Sbjct 117461 AGAGGCACGTCGGGGATCTGGGCAACGT 117434 >seq20824 Length=12435 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/149 (74%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 107163 TGCCGCACGGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTA 107222 || ||| ||| ||||||||| |||||||||||||||||||||| | |||||||| Sbjct 7368 TGGCGCCCGGCAAGCACGGCTTTCACGTGCACGAATTTGGCGACAATACGAACGGCTGCG 7309 Query 107223 CGTCCGCCGGTGAACACTTCAATCC-CACATACCAAAATCACGGTGCGCCCGACGCCGTA 107281 || || || | || |||||||| || || | | ||| || || |||| || Sbjct 7308 TGT-CGGTGGCGCTCATTTCAATCCGTGCAAAC--GGACCCCGGCGCTCCGGACGACGAG 7252 Query 107282 GAAAGGCACGTCGGCGATCTGGGCAACGT 107310 || ||||||||||| |||||||||||||| Sbjct 7251 GAGAGGCACGTCGGGGATCTGGGCAACGT 7223 >seq45287 Length=50511 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||||||||| || |||| ||||| ||||| || | || |||||| | Sbjct 2447 ATGCAAATATTTGTCAAGACCCTAACAGGCAAGACCATCACACTTGAGGTTGAGCCTAGC 2388 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || ||| || || ||||| || ||| | || ||||| Sbjct 2387 GACACCATCGACAATGTGAAAGCAAAAATCCAGGACAAGGAGGGCATCCCACCCGATCAG 2328 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | || || || ||||||||||||| ||| || | | || ||||| Sbjct 2327 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCAGGACTCTATCTGACTACAAT 2268 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || || || || |||||| |||| | | ||||| || || Sbjct 2267 ATCCAGAAGGAGTCCACCTTGCACCTGGTCCTGCGGCTGCGCGGTGG 2221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412594180674782