Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Macrostomum_20lignano_20[genbank_20GCA_5F001188465.1_202015-07-29] 49,174 sequences; 1,040,124,789 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq49094 93.3 4e-14 seq47908 93.3 4e-14 seq45308 93.3 4e-14 seq4339 93.3 4e-14 seq48 93.3 4e-14 seq7193 84.2 2e-11 >seq49094 Length=36862 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 21750 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 21691 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 21690 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 21631 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 21630 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 21572 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 21571 GCCAGTGAGCGTCTTGACGAAGATCTGCAT 21542 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 21978 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 21919 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 21918 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 21859 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 21858 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 21800 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 21799 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 21770 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 21522 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 21463 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 21462 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 21403 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 21402 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 21344 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || ||||| || || ||||| |||||| Sbjct 21343 GCCGGTGAGCGTCTTGACGAAGATCTGCATC 21313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 22206 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 22147 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 22146 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 22087 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 22086 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 22028 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 22027 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 21998 >seq47908 Length=47913 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 8688 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 8629 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 8628 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 8569 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 8568 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 8510 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 8509 GCCAGTGAGCGTCTTGACGAAGATCTGCAT 8480 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 8916 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 8857 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 8856 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 8797 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 8796 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 8738 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 8737 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 8708 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 8460 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 8401 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 8400 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 8341 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 8340 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 8282 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || ||||| || || ||||| |||||| Sbjct 8281 GCCGGTGAGCGTCTTGACGAAGATCTGCATC 8251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 9144 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 9085 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 9084 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 9025 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 9024 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 8966 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 8965 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 8936 >seq45308 Length=123861 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| ||| || || |||||||| || | || || | |||| || Sbjct 119535 ACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGATAGAGTCCTGCCGTCCTCC 119476 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || | ||||||||||||| || | || ||| |||||| | Sbjct 119475 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 119416 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 |||||| ||| | | | | || ||||| | ||| || || | ||||| | || Sbjct 119415 ATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTGATGGTCTTG 119356 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| |||||||| Sbjct 119355 CCCGTTAGGGTCTTGACAAATATTTGCAT 119327 >seq4339 Length=44113 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 37307 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 37366 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 37367 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 37426 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 37427 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 37485 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 37486 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 37515 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || ||||| || || ||| | || ||| Sbjct 37535 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAATCACTCAGAGTGCGTCCATCCTCA 37594 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||| | || | || ||| ||||| | Sbjct 37595 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 37654 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 37655 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 37713 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 37714 GCCAGTGAGCGTCTTGACGAAGATCTGCAT 37743 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 37763 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 37822 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 37823 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 37882 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 37883 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 37941 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || || ||||| || || ||||| |||||| Sbjct 37942 GCCGGTGAGCGTCTTGACGAAGATCTGCATC 37972 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || |||||||| || || || || || ||| || || ||| | || || Sbjct 37079 ACCAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGTCCATCTTCC 37138 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || ||||||||||| || | || | || ||| ||||| | Sbjct 37139 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGG 37198 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | || ||||| | ||| || |||| ||||| | || Sbjct 37199 ATCTTAGCCTTCA-CGTTGTCGATGGTGTCGCTGGGCTCAACCTCCAGGGTGATCGTCTT 37257 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || ||||| || || ||||| ||||| Sbjct 37258 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 37287 >seq48 Length=38877 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| ||| || || |||||||| || | || || | |||| || Sbjct 33779 ACCAGGTGCAGAGTGGACTCCTTCTGGATATTATAGTCAGATAGAGTCCTGCCGTCCTCC 33720 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || | ||||||||||||| || | || ||| |||||| | Sbjct 33719 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGG 33660 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 |||||| ||| | | | | || ||||| | ||| || || | ||||| | || Sbjct 33659 ATTTTCGCTTTCACATTGTCGATGGTGTCGCTAGGCTCAACCTCAAGTGTGATGGTCTTG 33600 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || ||||| |||||||| Sbjct 33599 CCCGTTAGGGTCTTGACAAATATTTGCAT 33571 >seq7193 Length=55923 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||| || ||||| |||| || ||||| ||||| || || Sbjct 18054 CTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCGTCTTCCAGCTGCTTGCCGGCGAA 18113 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || | |||||||| || | || | || ||| |||||| ||| || |||| ||| Sbjct 18114 GATCAAGCGCTGCTGATCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 18172 Query 39213 CGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || | ||| || |||| |||||| | |||||||| || || || | Sbjct 18173 TGTCGATGGTGTCCGAAGGCTCAACCTCCAGCGTGATGGTCTTTCCCGTGAGGGTCTTCA 18232 Query 39272 CAAAGATTTGCAT 39284 ||||||||||||| Sbjct 18233 CAAAGATTTGCAT 18245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429288169831862