Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq46 93.3 8e-14 >seq46 Length=2247445 Score = 93.3 bits (102), Expect = 8e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| ||||||||| ||||||||||||| || || || || || ||||||||||| Sbjct 184798 GCCGATACCTCCAGCATTCTTGGAGATGATAGCACATTCTTTGAGTGTGTCATAAATACC 184857 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 || || || || |||| | | ||||| || ||| | ||| ||| | || Sbjct 184858 TTCGATACTGTCGTCTTTCATTGTGATCAGGAAACAGCTGGACATTTGCGGTCTAGTAGT 184917 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGAT 94960 |||| ||||||||| || || |||||||||||||| | | | |||||| |||| Sbjct 184918 ACCACTATTAAACAGGGTCGGTGAAGCATGGGTAAACCACTTCTCCGACATTAGAT 184973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989048741436280