Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09]
42,216 sequences; 620,452,578 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq168 91.5 1e-13
>seq168
Length=1129759
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| ||||| ||||| ||| ||| || ||||| || ||||| ||| ||| ||||
Sbjct 773906 AAAACCAAGTGTAGAGTGGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGTCCATCT 773965
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|| | |||||| || ||||| ||||| ||||||||||| | || | ||||| || |||
Sbjct 773966 TCGAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCCTTCCTTGTCT 774025
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGC-TCCACATCGACCGTAATTGT 44088
|| || || || | ||| |||||| || || || || || | || || ||
Sbjct 774026 TGGATCTTCGCCTTCACATTCTCAATAGTATC-GCTTGCTTCAACTTCAAGGGTGATCGT 774084
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| || || | ||||||||| ||||| ||||||
Sbjct 774085 CTTCCCAGTAAGAGTCTTCACGAATATCTGCATG 774118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354595064263968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |