Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq666 86.0 5e-12 >seq666 Length=114481 Score = 86.0 bits (94), Expect = 5e-12 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 48503 CCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-A 48561 |||||||| | | || |||||||| ||| |||||||||||||||||||||| | | Sbjct 72287 CCGCGCAAACGGATCATCAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGA 72228 Query 48562 TTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 || || |||| |||| ||||||||| | |||| |||||||||||||| Sbjct 72227 GTG-CGACCGTCTTCCAACTGCTTACCTGCAAAAATCAAACGCTGCTGATC 72178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421034463098216