Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq276 120 3e-22 >seq276 Length=693516 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 21474 AACATGCA----AAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAAT 21529 |||||||| || || || |||| ||||||||| ||||| || | ||||||| || Sbjct 676615 AACATGCAGGCGAAGTCGCAGTGCAGACCTTCATCTCTACTGATCAGTTCATTACTGAAG 676674 Query 21530 GTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGA 21588 ||||| || ||||| || || | ||||| | ||||||||||| || || ||| || || Sbjct 676675 GTTAACCCAGGCATCAAGCCGCGTTTTTTCAGCCAAAATATTGCGGCGAA-GCTGCCAGA 676733 Query 21589 AAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTT 21648 |||||||||||||| || |||||||| |||||||| || || | | ||||| | | Sbjct 676734 GAAGAAAATGCCCTCGACTGCAGCAAAGGCAACTAAACGCTCCGCAAACGTAGAGTGAGT 676793 Query 21649 ATCCAATATCCATTTTTCTGCCCATTTTGCCTT 21681 ||| ||||| || ||||||| ||||| Sbjct 676794 ATCGCCAATCCAGTTAAGCGCCCATTGCGCCTT 676826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531620115947840