Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq168 100 2e-16 >seq168 Length=1129759 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 16703 ATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAG 16762 ||||| || || || || | || |||| |||| || ||||| || || ||||||||| Sbjct 735611 ATTTAGCCACCACGAAGGCGCAAAACCAAGTGCAAAGTAGACTCTTTCTGGATGTTGTAG 735670 Query 16763 TCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 || | || || ||||||||||||| ||||| || ||||||| || || ||||| Sbjct 735671 TCAGACAATGTACGACCGTCCTCCAATTGCTTGCCGGCGAAAATAAGGCGTTGCTGGTCA 735730 Query 16823 ACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 || | ||| || || || ||| | | |||||| | | | ||||||| | | Sbjct 735731 GGTGGGATGCCTTCCTTATCTTGAATCTTCGCCTTCACGTTCTCAATTGTGTCGCTAGCC 735790 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || | |||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 735791 TCAACCTCGAGGGTGATCGTTTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 735843 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||| || || ||||||||||| | || || | ||||| Sbjct 735860 AGCACCAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAACGTACGGCCGTCC 735919 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| |||||||| || ||||||| || || ||||| || | ||| || || || Sbjct 735920 TCCAACTGTTTGCCGGCGAAAATAAGGCGTTGCTGGTCAGGTGGGATGCCTTCCTTATCT 735979 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | |||||| | | | ||||| | || ||| || | ||||| || Sbjct 735980 TGAATCTTCGCCTTCACGTTCTCAATTGTGTCACTGGCCTCGACCTCAAGAGTGATCGTC 736039 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || ||||||||||| || || || ||||||||| || Sbjct 736040 TTGCCGGTCAGCGTCTTCACGAAGATCTGCATTGTG 736075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404879579185840