Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq46 84.2 3e-11 >seq46 Length=2247445 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||| | ||| || |||| ||||| || || |||||| | ||||| ||||||||||| Sbjct 184954 GTTTACCCATGCTTCACCGACCCTGTTTAATAGTGGTACTACTAGACCGCAAATGTCCAG 184895 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 |||||||| || ||| || || || ||| | || ||||| | ||| |||| || Sbjct 184894 CTGTTTCCTGATCACAATGAAAGACGACAGTATCGAAGGTATTTATGACACACTCAAAGA 184835 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGG 111859 |||||| ||||| ||| ||||| |||||||| Sbjct 184834 ATGTGCTATCATCTCCAAGAATGCTGGAGGTATCGG 184799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620414834235520