Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq276 86.0 1e-11 >seq276 Length=693516 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186 ||||||||| ||||| | ||||| ||||| || | ||||| || | || |||| Sbjct 676617 CATGCAGGCGAAGTCGCAGTGCAGACCTTCATCTCTACTGATCAGTTCATTACTGAAGGT 676676 Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246 | |||||||| | || | | ||| ||||| || ||||| ||||| ||||||||| Sbjct 676677 TAACCCAGGCATCAAGCCGCGTTTTTTCAGCCAAAATATTGCGGCGAAGCTGCCAGAGAA 676736 Query 48247 GAAGATGCCCTCCACTGCCGCGAACGC 48273 ||| |||||||| ||||| || || || Sbjct 676737 GAAAATGCCCTCGACTGCAGCAAAGGC 676763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931041230141440