Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq121 192 4e-43 seq168 134 9e-26 seq233 123 2e-22 seq190 113 3e-19 >seq121 Length=1419867 Score = 192 bits (212), Expect = 4e-43 Identities = 377/552 (68%), Gaps = 8/552 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||| |||| || ||||| || ||||| ||| || || | || | || |||| ||| Sbjct 1280225 GCAGTTGGGATCGATTTGGGCACTACATACTCGTGCGTTGGAGTGTTCCAGCATGGAAAA 1280166 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| |||||||| || ||||| ||| | || ||||| |||||| | || || Sbjct 1280165 GTGGAAATCATTGCCAACGATCAAGGAAATCGCACGACACCCAGCTATGTTGCGTTCACA 1280106 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| || ||||| ||||| || ||| |||||| ||| ||||| || Sbjct 1280105 GATACCGAACGACTGATTGGTGATGCCGCCAAAAATCAAGTAGCAATCAATCCAAGCAAC 1280046 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| | || ||||| |||||| |||| ||||| ||||||||| | | || ||| Sbjct 1280045 ACTGTGTTCGATGCGAAAAGACTGATCGGTCGGCGATTTGATGATCCATCGGTGACGTCT 1279986 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 || |||||| |||| | || || | | |||||||| ||| | | | Sbjct 1279985 GACCGAAAACATTGGTCTTTCGAAGTTATCCAAGAGGGTGGTAAGCCAAAGGTCCGTGTG 1279926 Query 474628 -AATACACGCAGGTGAAACTAAACAATTT-TCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| ||| | | | || | || || | || | || ||||||||||| || Sbjct 1279925 GAATACA---AGGGGGAGGTCAAGACGTTCTCGGCAGAGGAGATATCTTCAATGGTGTTG 1279869 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAAT 474744 | |||||||| | || || ||||||| || | |||| | | ||||| || || Sbjct 1279868 ACGAAAATGAAGGAGACAGCCGAAGCATATCTGGGT-ACGAAGGTGAAGGATGCCGTGAT 1279810 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||||||||| || ||||| || || || |||||||| || || |||||||| || Sbjct 1279809 TACTGTTCCGGCTTATTTCAACGACAGCCAGCGTCAAGCCACGAAGGATGCGGGTGCCAT 1279750 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| || || || ||||| || || || || ||||| ||||| || || |||||||||| Sbjct 1279749 TGCTGGCCTGAACGTTTTGCGAATCATCAACGAACCGACAGCTGCTGCGATTGCTTATGG 1279690 Query 474865 TCTTGATAAGAA 474876 | | || ||||| Sbjct 1279689 TTTGGACAAGAA 1279678 Score = 179 bits (198), Expect = 2e-39 Identities = 396/588 (67%), Gaps = 12/588 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || ||| | || || || | | ||||| | ||| | ||||| || Sbjct 1389723 GCGATTGGAATCGATCTGGGGACCACGTTCTCATGTGTGGGTGTATTCCAAAACAACAAG 1389664 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||||| ||||||||||| || | ||||| || ||||| | |||||| Sbjct 1389663 GTGGAAATCATTGCAAATGACCAAGGGAACCGCACAACTCCGAGTTATGTGGCCTTTACT 1389604 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| | | ||||| ||||| || || | || | ||| ||||| | ||| Sbjct 1389603 GAGACCGAACGTTTGATTGGTGATGCGGCCAAGAACCAGGTTGCTATGAATCCAGCTAAC 1389544 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || ||||| ||| | || || ||||||| | ||||| | ||||| ||| Sbjct 1389543 ACGGTCTTCGATGCCAAACGCTTAATCGGTCGTAGGTACGATGACCCTACTGTTCAAGAG 1389484 Query 474569 GATATGCGTCAT---TGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 ||| ||| | ||||| || | |||| | | || ||||| | || | Sbjct 1389483 GAT---CGTAAAATGTGGCCATTCACATTGATTGAAGAAAACGGCAAACCGAAGATCCAG 1389427 Query 474626 GC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 | |||||| |||| ||| ||| || | | ||| | || || || ||||| | Sbjct 1389426 GTCGAATACAA--AGGTCAAAAGAAAACGTTCTTTGCTGAAGAGATATCCTCGATGGTGT 1389369 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTA 474742 | | || ||||| || |||| | ||| |||| |||| | | | ||| ||||| Sbjct 1389368 TGACAAAGATGAAGGAAGTCGCGGAAGCCTAT-TTGGGGAAGACGGTCAGTGAGGCAGTC 1389310 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || ||||| || || || || |||||| |||| | || || || || ||||| || | Sbjct 1389309 ATCACTGTGCCGGCCTACTTCAATGATAGTCAAAGGCAGGCCACGAAGGATGCAGGGACG 1389250 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| || ||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct 1389249 ATTGCCGGTCTAAACGTTCTACGGATTATCAATGAACCAACAGCAGCAGCTATTGCTTAT 1389190 Query 474863 GGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 || || |||||||| | | || ||| ||| ||| | || || ||| Sbjct 1389189 GGCCTGGATAAGAAGGCCGGTAACGAAAGAAACGTTCTCATTTTCGAT 1389142 Score = 170 bits (188), Expect = 1e-36 Identities = 370/548 (68%), Gaps = 8/548 (1%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| || ||||| || || || ||| || || | || | || |||| ||||| | Sbjct 1319513 TTGGAATCGATTTGGGTACGACATACTCGTGCGTTGGAGTGTTCCAGCATGGAAAAGTGG 1319454 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| |||||||| || | | ||| | || ||||| || ||| | || || || | Sbjct 1319453 AAATCATTGCCAACGAACGATCAAATCGCACGACACCCAGCTACGTTGCGTTCACGGATA 1319394 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| || ||||| |||||||| ||| |||||| ||| ||||| || ||| Sbjct 1319393 CCGAACGACTGATTGGCGATGCTGCGAAAAATCAAGTCGCAATCAATCCAAGCAACACTG 1319334 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || ||||| |||||| |||| ||||| ||||||||| | | || ||||| Sbjct 1319333 TGTTCGATGCGAAAAGACTGATCGGTCGGCGATTTGATGATCCATCGGTGACGTCTGACC 1319274 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AAT 474630 || ||| |||| | || || | | |||||||| ||| | | | ||| Sbjct 1319273 GAAAACACTGGTCTTTCGAAGTTATCCAAGAGGGTGGTAAGCCAAAGGTCCGTGTGGAAT 1319214 Query 474631 ACACGCAGGTGAAACTAAACAATTT-TCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 ||| ||| | | | || | || || | || | || ||||||||||| || | | Sbjct 1319213 ACA---AGGGGGAGGTCAAGACGTTCTCGGCAGAGGAGATATCTTCAATGGTGTTGACGA 1319157 Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACT 474748 ||||||| | || || ||||||| || | |||| | | ||||| || |||||| Sbjct 1319156 AAATGAAGGAGACAGCCGAAGCATATCTGGGT-ACGAAGGTGAAGGATGCTGTGATTACT 1319098 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || || || ||||| || |||||||| || || |||||||| | ||||| Sbjct 1319097 GTTCCGGCTTACTTCAATGACAGCCAGCGTCAAGCGACGAAGGATGCGGGTACGATTGCT 1319038 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 || || || ||||| || || || || ||||| ||||| || || ||||||||||| | Sbjct 1319037 GGCCTGAACGTTTTGCGAATAATCAACGAACCGACAGCTGCTGCGATTGCTTATGGTTTG 1318978 Query 474869 GATAAGAA 474876 || ||||| Sbjct 1318977 GACAAGAA 1318970 Score = 159 bits (176), Expect = 2e-33 Identities = 371/551 (67%), Gaps = 14/551 (3%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| || ||| | || || || ||| || || | || | || |||| ||||| | Sbjct 1166778 TTGGAATCGATCTGGGTACGACATACTCATGCGTCGGAGTGTTCCAGCATGGAAAAGTGG 1166837 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 ||||||| ||||| || ||||| ||| | |||||||| |||||| | || || || | Sbjct 1166838 AAATAATCGCCAACGATCAAGGAAATCGCACAACACCCAGCTATGTTGCATTCACGGATA 1166897 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| || ||||| ||||| |||||| |||||| ||| || || || || Sbjct 1166898 CCGAACGACTGATTGGTGATGCCGCTAAAAATCAAGTCGCAATGAACCCAAACAACACCG 1166957 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || |||| || ||| |||| ||||| || |||||| | | || | |||| Sbjct 1166958 TGTTCGATGTCAAGAGACTGATCGGTCGGCGATTCGATGATCCATCAGTGATAGCTGAC- 1167016 Query 474573 TGCGT---CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC-- 474627 ||| || ||||| ||| ||||| | | | |||||||| || | | | Sbjct 1167017 --CGTAAGCACTGGCCATTTGAGGTGGTCCAAGAAGGTGGTAAGCCGAAGGTCCGTGTGG 1167074 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | |||| |||||| | || || || || ||| | || || || ||||| | | Sbjct 1167075 AGTACAA--AGGTGAGATCAAGACGTTCTCGCCAGAAGAGATATCGTCGATGGTGCTGAC 1167132 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATT 474745 || ||||| | || || ||| | ||||| || || ||| || | ||||| || ||| Sbjct 1167133 AAAGATGAAGGAGACAGCTGAGG-CGTATCTGGG-CACGAAAGTGAAGGATGCTGTGATT 1167190 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 |||||||| || || || || || || |||||||| || || |||||||| ||| Sbjct 1167191 ACTGTTCCGGCTTACTTCAACGACAGCCAGCGTCAAGCGACGAAGGATGCGGGTGCCATT 1167250 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || |||||||| ||||| || || ||||| ||||| || || |||| || || Sbjct 1167251 GCTGGCCTCAATGTTTTGCGTATCATCAACGAACCGACAGCTGCGGCGATTGCATACGGG 1167310 Query 474866 CTTGATAAGAA 474876 || || ||||| Sbjct 1167311 CTAGACAAGAA 1167321 Score = 150 bits (166), Expect = 1e-30 Identities = 369/551 (67%), Gaps = 14/551 (3%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| || ||| | || || || ||| || || | || | || |||| ||||| | Sbjct 1093508 TTGGAATCGATCTGGGTACGACATACTCATGCGTCGGAGTGTTCCAGCATGGAAAAGTGG 1093449 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 ||||||| ||||| || ||||| ||| | |||||||| |||||| | ||||| || | Sbjct 1093448 AAATAATCGCCAACGATCAAGGAAATCGCACAACACCCAGCTATGTTGCATTTACGGATA 1093389 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | |||| || ||||| ||||| |||||| |||||| ||| || || || || Sbjct 1093388 CCGAACGACTGATTGGTGATGCCGCTAAAAATCAAGTCGCAATGAACCCAAACAACACCG 1093329 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | || |||| || ||| |||| ||||| || |||||| | | || | |||| Sbjct 1093328 TGTTCGATGTCAAGAGACTGATCGGTCGGCGATTCGATGATCCATCAGTGATAGCTGAC- 1093270 Query 474573 TGCGT---CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC-- 474627 ||| || ||||| ||| | ||| | | | |||||||| || | | | Sbjct 1093269 --CGTAAGCACTGGCCATTTGAAGTGGTCCAAGAAGGTGGTAAGCCGAAGGTCCGTGTGG 1093212 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | |||| |||||| | || || || || || | || || || ||||| | | Sbjct 1093211 AGTACAA--AGGTGAGATCAAGACGTTCTCGCCAGAGGAGATATCGTCGATGGTGCTGAC 1093154 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATT 474745 || ||||| | || || ||| | ||||| || || ||| || | ||||| || ||| Sbjct 1093153 AAAGATGAAGGAGACAGCCGAGG-CGTATCTGGG-CACGAAAGTGAAGGATGCTGTGATT 1093096 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 |||||||| || || || || || || |||||||| || || |||||||| ||| Sbjct 1093095 ACTGTTCCGGCTTACTTCAACGACAGCCAGCGTCAAGCGACGAAGGATGCGGGTGCCATT 1093036 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || || || |||||||| ||||| || || ||||| ||||| || || | || || || Sbjct 1093035 GCTGGCCTCAATGTTTTGCGTATCATCAACGAACCGACAGCTGCGGCGATCGCATACGGG 1092976 Query 474866 CTTGATAAGAA 474876 || || ||||| Sbjct 1092975 CTAGACAAGAA 1092965 Score = 145 bits (160), Expect = 5e-29 Identities = 445/678 (66%), Gaps = 10/678 (1%) Strand=Plus/Minus Query 475494 GAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAG 475553 |||| || ||||||||||| || ||| || | ||| | | || | | ||| || Sbjct 1388834 GAACAGCCTGTGAACGTGCCAAACGAACTTTGAGTTCAAGTGCACAGGCCAATGTCGAGA 1388775 Query 475554 TTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAG 475613 ||||||| |||||||||||| | || | | |||| ||||| | || ||| || | Sbjct 1388774 TTGATTCGCTTTTTGAAGGACTAGACTTTTATACCACCATTACTCGCGCCCGATTCGAGG 1388715 Query 475614 ATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATT 475673 | | ||||| | || ||| || | || || || ||| ||| || ||||| Sbjct 1388714 AACTCAACGCTGATTTGTTCCGAAGTACTTTGGACCCAGTCGAAAAAGCGCTAAGAGACG 1388655 Query 475674 CTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTC 475733 | ||| | |||| || ||| | || || |||||||| || || |||||||| |||| | Sbjct 1388654 CCAAAATGAACAAGTCGCAAATTCACGAGATTGTTCTCGTGGGTGGTTCAACCCGAATCC 1388595 Query 475734 CAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA 475792 | ||||| |||||| | || | |||| || || ||| |||| || || | | Sbjct 1388594 CGAAAATTC-AGAAATTGCTCCAAGAGTTTTTCAACGGAAAAGAGTTGAACAAATCTATC 1388536 Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT-TTATCAG-GTC 475850 |||||||||||||| || || ||||||||||| || || || || ||| ||| | | ||| Sbjct 1388535 AATCCTGATGAAGCAGTAGCCTATGGAGCTGCCGTTCAGGCCGCAATTCTTACCGGAGTC 1388476 Query 475851 AATCAGACGAGAAACTAAATAATA-TTG-TACTTGTTGACGTAACTCCACTTTCATTAGG 475908 || || || || || | ||| | | |||| || || || | || ||||| Sbjct 1388475 ---CAATCG-GATACCGTTCAAGACTTGCTGTTACTTGATGTGACACCTTTGTCCTTAGG 1388420 Query 475909 TCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATG 475968 | | ||||| | ||||| | ||||| || || | |||| || |||||||| Sbjct 1388419 TTTGGAAACTGCCGGAGGTGTGATGACGTCACTGATCAAACGAAACACGACTATCCCAAC 1388360 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||| || || || ||| | || || | || |||||| | || || || | Sbjct 1388359 AAAACAAACACAAACGTTTACGACATACGCAGACAATCAACCTGGCGTTCTGATACAGGT 1388300 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 | ||||| ||| | | || | ||||| ||| | |||| ||| || | Sbjct 1388299 TTACGAAGGCGAACGTGCCATGACCAGGGATAACAACCTTTTGGGAAAATTTGATTTGTC 1388240 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 || ||||| ||||| || |||| | || |||||||| || |||||||| ||||| || Sbjct 1388239 TGGGATTCCACCTGCCCCTCGAGGTATACCCCAAATTGAGGTCACTTTTGACATTGACGC 1388180 Query 476149 AAATGGTATTCTTAATGT 476166 ||||| ||||| ||||| Sbjct 1388179 GAATGGGATTCTGAATGT 1388162 Score = 129 bits (142), Expect = 4e-24 Identities = 362/551 (66%), Gaps = 6/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || ||||| || || || || || || | || | || |||| || Sbjct 1341027 GCTATTGGAATCGATTTGGGCACGACCTATTCCTGCGTCGGAGTGTTCCAGCATGGAAAG 1341086 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || |||||||| || ||||| || | ||||| || ||||| | ||||| Sbjct 1341087 GTGGAGATCATTGCCAACGATCAAGGAAACCGGACAACTCCGAGTTATGTGGCGTTTACC 1341146 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || |||| || || || ||||| ||||| | || | |||| ||||| ||| Sbjct 1341147 GACACCGAACGCCTCATCGGTGATGCAGCTAAGAACCAGGTTGCAATGAATCCAACCAAT 1341206 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||| ||||| || ||||||| ||||| || |||||| | | || ||||| Sbjct 1341207 ACCGTTTTCGATGCCAAGCGATTGATCGGTCGCCGATTCGATGATGCTTCGGTTCAATCC 1341266 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 || ||| || ||||| || || || | ||| || || || | || ||| Sbjct 1341267 GACATGAAACACTGGCCATTCAATGTTGTTGATGACAAGGGCAAGCCGAAGATTCAAGTG 1341326 Query 474628 -AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| ||| || || || ||| || || ||| | || || | |||||||| | Sbjct 1341327 GAATACAG--AGGCGAGACAAAGACATTCTCGCCCGAAGAGATATCGGCCATGGTTTTGG 1341384 Query 474687 CCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATT 474745 |||||||| | | ||| | || ||||| || | || | |||||||| | Sbjct 1341385 GGAAAATGAAGGAGATCGCCGAAGCCTA-CTTGGGCACCACTGTGAAGGATGCAGTCGTC 1341443 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| || || || || ||||| |||||||||||| || || |||||||| | || Sbjct 1341444 ACTGTGCCTGCCTACTTCAATGACAGTCAACGTCAAGCTACGAAGGATGCGGGTCGTATC 1341503 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || | || ||| | || || || || || ||||| || || | ||||||||| Sbjct 1341504 GCCAACTTAAACGTTCAGAGAATCATCAACGAGCCCACAGCTGCTGCGATCGCTTATGGT 1341563 Query 474866 CTTGATAAGAA 474876 | || || || Sbjct 1341564 TTGGACAAAAA 1341574 >seq168 Length=1129759 Score = 134 bits (148), Expect = 9e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| | || ||||||| ||||| Sbjct 774124 ACGCAGACGAAGCACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGACAGAGT 774183 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || |||||||| | ||||| || || || || || || Sbjct 774184 TCGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCC 774243 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || ||| ||||||||||| | | | |||||| Sbjct 774244 TTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAG 774303 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || |||||||| || ||||| ||||| || || Sbjct 774304 GGTAATCGTCTTACCGGTCAGGGTCTTCACGAATATCTG 774342 Score = 134 bits (148), Expect = 9e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| | || ||||||| ||||| Sbjct 774352 ACGCAGACGAAGCACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGACAGAGT 774411 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || |||||||| | ||||| || || || || || || Sbjct 774412 TCGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCC 774471 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || ||| ||||||||||| | | | |||||| Sbjct 774472 TTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAG 774531 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || |||||||| || ||||| ||||| || || Sbjct 774532 GGTAATCGTCTTACCGGTCAGGGTCTTCACGAATATCTG 774570 Score = 134 bits (148), Expect = 9e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| | || ||||||| ||||| Sbjct 774580 ACGCAGACGAAGCACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGACAGAGT 774639 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || |||||||| | ||||| || || || || || || Sbjct 774640 TCGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCC 774699 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || ||| ||||||||||| | | | |||||| Sbjct 774700 TTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAG 774759 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || |||||||| || ||||| ||||| || || Sbjct 774760 GGTAATCGTCTTACCGGTCAGGGTCTTCACGAATATCTG 774798 Score = 134 bits (148), Expect = 9e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| | || ||||||| ||||| Sbjct 774808 ACGCAGACGAAGCACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGACAGAGT 774867 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || |||||||| | ||||| || || || || || || Sbjct 774868 TCGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCC 774927 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || ||| ||||||||||| | | | |||||| Sbjct 774928 TTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAG 774987 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || |||||||| || ||||| ||||| || || Sbjct 774988 GGTAATCGTCTTACCGGTCAGGGTCTTCACGAATATCTG 775026 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || |||||| | || ||||||| ||||| Sbjct 775036 ACGCAGACGAAGCACCAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGACAGAGT 775095 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||||||||| || || |||||||| | ||||| || || || || || || Sbjct 775096 TCGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCC 775155 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||| ||||| || ||| ||||||||||| | | | |||||| Sbjct 775156 TTCCTTGTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAG 775215 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || |||||||| ||||| || || Sbjct 775216 GGTGATCGTCTTCCCAGTAAGAGTCTTCACGAAGATCTG 775254 Score = 96.9 bits (106), Expect = 2e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| ||||| || || |||||||| | ||||| || || || || || |||||||| Sbjct 773962 ATCTTCGAGTTGTTTGCCGGCAAAAATCAAGCGTTGCTGGTCGGGTGGGATGCCTTCCTT 774021 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| || ||| ||||||||||| | | | ||||||||| || Sbjct 774022 GTCTTGGATCTTCGCCTTCACATTCTCAATAGTATCGCTTGCTTCAACTTCAAGGGTGAT 774081 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || || Sbjct 774082 CGTCTTCCCAGTAAGAGTCTTCACGAATATCTG 774114 >seq233 Length=855571 Score = 123 bits (136), Expect = 2e-22 Identities = 256/380 (67%), Gaps = 6/380 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 ||||| |||||||| || || |||| ||||| ||||| | || | || ||||| | Sbjct 106444 AATCCGGATGAAGCGGTGGCTAATGGTGCTGCCGTCCAGGGAGGTGTT--ATCAGTGGAG 106501 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 | ||||| | | |||||||| |||| || ||| || | | || | Sbjct 106502 TG----GAGAACACAGGTGGAGTTGTACTTCTTGATGTTTGTCCGCTGACCCTTGGAATC 106557 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 ||||| || || || |||||||||| || || |||| || || ||| ||| Sbjct 106558 GAAACCGTCGGTGGTGTTATGACTAAGCTGATCTCGCGAAACACAGTAATTCCAACGAAA 106617 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || || | |||||||||||| | |||| || ||| | || || ||||| ||| | ||| Sbjct 106618 AAGTCGCAGGTATTTTCCACTGCTGCTGACAACCAACCCACGGTTACCATTCAAGTGTTT 106677 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 ||||| ||||| | || ||||| ||| | | || | || ||| ||||| ||| Sbjct 106678 GAAGGAGAAAGGCCGATGACGAAAGACAATCATTACCTCGCAAAGTTTGATCTTACAGGA 106737 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || ||||| ||||| | || || ||||| || ||||| || || || || |||| || Sbjct 106738 ATCCCTCCAGCTCCTCGCGGTGTACCTCAGATAGAAGTCACCTTCGAAATCGATGTGAAC 106797 Query 476153 GGTATTCTTAATGTTACTGC 476172 ||||| || | |||||||| Sbjct 106798 GGTATCCTGCAGGTTACTGC 106817 >seq190 Length=1055212 Score = 113 bits (124), Expect = 3e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 || || || || ||||| || || |||||| || || ||||||| ||||| | | Sbjct 796621 AGTCGCAGGACCAGATGCAGGGTGGATTCTTTCTGAATGTTGTAATCAGAAAGAGTACGG 796562 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 || || || |||||||| || ||||| | || |||||||| ||||| || || ||| Sbjct 796561 CCGTCCTCCAGCTGCTTTCCCGCGAAAATCAATCGCTGTTGATCTGGAGGGATCCCCTCC 796502 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTA 480734 |||||||||||||| ||||||| ||| || ||||| | | | ||||| ||| Sbjct 796501 TTGTCTTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGCTTCAACCTCAAGTGTA 796442 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| ||||| ||||| || || Sbjct 796441 ATGGTCTTTCCCGTGAGTGTCTTGACGAAGATCTG 796407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266368350927968