Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq276 100 9e-16 >seq276 Length=693516 Score = 100 bits (110), Expect = 9e-16 Identities = 136/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| |||| || ||||||| ||||| || | || || |||||||| ||| | Sbjct 676775 GAGCGTTTAGTTGCCTTTGCTGCAGTCGAGGGCATTTTCTTCTCTGGCAGCTTC-GCCGC 676717 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 || || ||| ||||||| || || | |||| || | ||||| ||||| |||||||| Sbjct 676716 AATATTTTGGCTGAAAAAACGCGGCTTGATGCCTGGGTTAACCTTCAGTAATGAACTGAT 676657 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGT 443885 |||| | || || ||| |||| |||||||||||||| | | || |||| |||| || Sbjct 676656 CAGTAGAGATGAAGGTCTGCACTGCGACTTCGCCTGCATGTTATA---CAAATACATTGT 676600 Query 443886 GCACAAGC 443893 || |||| Sbjct 676599 TCAAAAGC 676592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587476880970120