Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Opisthorchis_20viverrini_20[refseq_20GCF_5F000715545.1_202014-07-09] 42,216 sequences; 620,452,578 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq129 86.0 8e-12 >seq129 Length=1394800 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 63784 CAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGT 63843 ||||| ||||| |||||||| || ||||||||||||||||| || || || || Sbjct 342695 CAAAAGGGTACTTGTGGTATTCGGTACCGACAAGAAGATATGCCGTTCACTTGTGAAGGC 342754 Query 63844 ATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGAC 63893 || || ||| || |||||||||| |||||| | |||||||||||||| Sbjct 342755 ATTACTCCAGATATCATCATCAATCCCCACGCTATCCCCAGTCGTATGAC 342804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666723184416960