Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 172 6e-38
seq75644 159 4e-34
seq110960 149 6e-31
seq148469 98.7 1e-15
seq70016 98.7 1e-15
>seq150668
Length=1318
Score = 172 bits (190), Expect = 6e-38
Identities = 301/436 (69%), Gaps = 4/436 (1%)
Strand=Plus/Minus
Query 16673 CTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTC 16732
|| ||||| |||| |||||| || |||||||| || ||||||||||| |||||||||||
Sbjct 1166 CTCTGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTT 1107
Query 16733 TCCATGAAATCAAAAGGA--TTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGA 16790
||||| |||||||| ||| || | || | |||| || | ||| || ||||| | |
Sbjct 1106 TCCATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCT--TGTAACCAAGTTCAGACA 1049
Query 16791 TTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAA 16850
| | ||| || ||||| ||||| || | ||||| | |||| ||||| || || |
Sbjct 1048 GAAGACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGA 989
Query 16851 GACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910
||| || || | ||| || || | |||| |||||| || || || |||| || |
Sbjct 988 GACTGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTA 929
Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970
|| | | | | ||| |||| | | | ||| ||||| | || || ||||
Sbjct 928 TAGAATGGATCCTCTTCTCTTCCGGTTTTGCAATGATATGCTTAAATAGGAGGCAAGCGA 869
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
|||||||||| | |||||| |||| || ||||| || || || || | |||||||
Sbjct 868 AATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCA 809
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
| || || || || | ||||||||||||||| || || || ||||| | ||| |
Sbjct 808 TAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTT 749
Query 17091 CGACGGATGCAAACGC 17106
| || | |||||| ||
Sbjct 748 CTACAGCTGCAAAAGC 733
>seq75644
Length=2520
Score = 159 bits (176), Expect = 4e-34
Identities = 584/905 (65%), Gaps = 47/905 (5%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| || | ||| || || || || ||||| ||||||||||| | || |||||||
Sbjct 585 TTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATTCT 644
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
|||| |||||||| ||||| ||| | |||| || | ||| || || ||| |
Sbjct 645 CCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT--CGTAACCAAGCTCGTATAG 702
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
|| | ||| || |||||||| | || ||||||| | || |||||||| || || ||
Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762
Query 16852 ACGTACCGGAAGAGCTTCCGTCAA-AAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910
||| || | || || | || ||| | || ||||| | | || ||||| | |
Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 821
Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACATCAGACATGC 16968
|| | ||| ||||||| | | | | || | | |||||| |||| || || ||
Sbjct 822 TAGCATAAACACGTTCCT--TATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGC 879
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
|| ||| || | || ||||| | || |||||||| || || ||||| || ||
Sbjct 880 AAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGG 939
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
|||| || || ||||| | ||||||||| | || || || |||||||| | ||
Sbjct 940 CATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCC 999
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|||| | ||||| || | || ||||| |||| | | | | | || ||||||
Sbjct 1000 TTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCCA 1059
Query 17149 TTTCTGCACCCACT-CGGCTTTTTGCTTTATGCAATCCATCGTTTCT-ATGGCCTTAAAT 17206
| | |||||| || ||||||| | || ||||| | |||| | ||||| |||||
Sbjct 1060 GTCAAGGGCCCACTGCGCCTTTTTG-TGTACACAATCGA-GGTTTGTGATGGCATTAAAC 1117
Query 17207 A--ATTTCTCT---------------------------TTTTCCTGTAGGTCGATTATAT 17237
| | ||||| |||||| | | || ||||
Sbjct 1118 AAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177
Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATC 17297
| ||||| || || || | ||||| || ||||| || || || || || ||||| | |
Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237
Query 17298 CGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCGTTCCGCTAGATT 17355
|||||||||||||| | || | || ||||||||| || || || |||||| | |||||
Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGAC-TA-AACCGTTCCACCAGATT 1295
Query 17356 TTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTT 17415
||| ||| || || || || || ||||| || || | | | | || |||| |
Sbjct 1296 TTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCG 1355
Query 17416 TTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGG 17475
|| | || |||| | ||| | | | |||||||| | ||| || |||||
Sbjct 1356 CTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAAC 1415
Query 17476 GGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGG 17535
| ||| || ||| || |||||||| || | | ||| ||||| ||||| || ||
Sbjct 1416 TGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 1475
Query 17536 GAATA 17540
||||
Sbjct 1476 CAATA 1480
>seq110960
Length=1818
Score = 149 bits (164), Expect = 6e-31
Identities = 582/906 (64%), Gaps = 48/906 (5%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
||||||| || | ||| || || || || ||||| ||||||||||| | || |||||||
Sbjct 1234 TTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATTCT 1175
Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
|||| |||||||| ||||| ||| | |||| || | ||| || || ||| |
Sbjct 1174 CCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT--CGTAACCAAGCTCGTACAG 1117
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
|| | ||| || |||||||| | || ||||||| | || |||||||| || || ||
Sbjct 1116 CAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAG 1057
Query 16852 ACGTACCGGAAGAGCTTCCGTCAA-AAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910
|| || | || || | || ||| | || ||||| | | || ||||| | |
Sbjct 1056 TTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 998
Query 16911 TACTAGCAACTCGTTCCTCGGACGGTGTATGTTTA--AGATGTTTAAACATCAGACATGC 16968
|| | ||| ||||||| | | | | || | | |||||| |||| || || ||
Sbjct 997 TAGCATAAACACGTTCCT--TATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGC 940
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
|| ||| || | || ||||| | || |||||||| || || ||||| || ||
Sbjct 939 AAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGG 880
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
|||| || || ||||| | ||||||||| | || || || |||||||| | ||
Sbjct 879 CATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCC 820
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|||| | ||||| || | || ||||| |||| | | | | | || ||||||
Sbjct 819 TTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCCA 760
Query 17149 TTTCTGCACCCACT-CGGCTTTTTGCTTTATGCAATCCATCGTTTCT-ATGGCCTTAAAT 17206
| | |||||| || ||||||| | || ||||| | ||| | ||||| |||||
Sbjct 759 GTCAAGGGCCCACTGCGCCTTTTTG-TGTACACAATCGA-GGTTCGTGATGGCATTAAAC 702
Query 17207 A--ATTTCTCT----------------------------TTTTCCTGTAGGTCGATTATA 17236
| | ||||| |||||| | | || |||
Sbjct 701 AAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATA 642
Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296
|||||||| || || || | ||||| || || || || || || || || ||||| |
Sbjct 641 TACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCATG 582
Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCGTTCCGCTAGAT 17354
||||||||||||||| | || | || ||||||||| || || || |||||| | ||||
Sbjct 581 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGAC-TA-AACCGTTCCACCAGAT 524
Query 17355 TTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATT 17414
|||| ||| || || || || || ||||| || || | | | | || |||| |
Sbjct 523 TTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTC 464
Query 17415 TTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGG 17474
|| | || |||| | ||| | | | |||||||| | ||| || |||||
Sbjct 463 GCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAA 404
Query 17475 GGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGG 17534
| ||| || ||| || |||||||| || | | ||| ||||| ||||| || |
Sbjct 403 CTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTG 344
Query 17535 GGAATA 17540
| ||||
Sbjct 343 GCAATA 338
>seq148469
Length=1339
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/184 (73%), Gaps = 5/184 (3%)
Strand=Plus/Minus
Query 119866 GTATCCGTTGGGATCCGTTCCATCTA-ACTCGTATTTATCGTTTAAGTAGATACAGACGC 119924
||| |||||||| ||| ||||||||| ||| ||||||||||| | | ||| | |
Sbjct 1200 GTAGCCGTTGGGGTCCCTTCCATCTAGACTA-TATTTATCGTTGAGGCGAATAGCTAGGG 1142
Query 119925 TTAACGCACTTTCAGGAGTCTC-GCT--CCATTCCAGTAtttttttAGCCCAGTACATAC 119981
||| || ||| || ||| ||| ||||||||||||||| || ||||| ||||| |
Sbjct 1141 CTAATGCTTCTTCTGGGCCCTCAGCTGTCCATTCCAGTATTTTCTTTGCCCAATACATTC 1082
Query 119982 GTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAGG 120041
| | | |||||||||| || ||||| | |||||| || || || || | ||||| ||
Sbjct 1081 GCAGGAATCCATGCATCTTGCCTTCTCTAACCATCTGTAGCTGGGCAGAATTCCACAAAT 1022
Query 120042 GATC 120045
||||
Sbjct 1021 GATC 1018
>seq70016
Length=2671
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/184 (73%), Gaps = 5/184 (3%)
Strand=Plus/Minus
Query 119866 GTATCCGTTGGGATCCGTTCCATCTA-ACTCGTATTTATCGTTTAAGTAGATACAGACGC 119924
||| |||||||| ||| ||||||||| ||| ||||||||||| | | ||| | |
Sbjct 2532 GTAGCCGTTGGGGTCCCTTCCATCTAGACTA-TATTTATCGTTGAGGCGAATAGCTAGGG 2474
Query 119925 TTAACGCACTTTCAGGAGTCTC-GCT--CCATTCCAGTAtttttttAGCCCAGTACATAC 119981
||| || ||| || ||| ||| ||||||||||||||| || ||||| ||||| |
Sbjct 2473 CTAATGCTTCTTCTGGGCCCTCAGCTGTCCATTCCAGTATTTTCTTTGCCCAATACATTC 2414
Query 119982 GTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGGCGTTCCATAAGG 120041
| | | |||||||||| || ||||| | |||||| || || || || | ||||| ||
Sbjct 2413 GCAGGAATCCATGCATCTTGCCTTCTCTAACCATCTGTAGCTGGGCAGAATTCCACAAAT 2354
Query 120042 GATC 120045
||||
Sbjct 2353 GATC 2350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515498720090640
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