Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 159 4e-34
seq75644 152 5e-32
seq110960 141 9e-29
>seq150668
Length=1318
Score = 159 bits (176), Expect = 4e-34
Identities = 576/901 (64%), Gaps = 40/901 (4%)
Strand=Plus/Minus
Query 15911 CTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTT 15970
|| ||||| || | |||||| || ||||| || || ||||| ||||| | ||||||||||
Sbjct 1166 CTCTGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTT 1107
Query 15971 TCCATAAAATCAAAGGGA--TTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAA 16028
|||||||||||||| ||| || | || | || ||||| ||| || ||||| | |
Sbjct 1106 TCCATAAAATCAAACGGATTTTCGGAGTTCCAA--ATCTTCTTGTAACCAAGTTCAGACA 1049
Query 16029 CTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAA 16088
| | ||| || ||||| ||||| || ||||||| | ||||||| || || || |
Sbjct 1048 GAAGACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGA 989
Query 16089 GTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148
| | || || | ||| | || | ||||| ||| || || || || || | || |
Sbjct 988 GACTGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTA 929
Query 16149 TATCGGTGGCTCGTGTT-TCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207
|| ||| || | || || |||| | | | || ||||| | || || |||
Sbjct 928 TA-GAATGGATCCTCTTCTCTTCCGGTTTTGCAATGATATGCTTAAATAGGAGGCAAGCG 870
Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267
|| |||||||| ||||| || |||| || ||||| || ||| || || | || |||
Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810
Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327
|| || || || || | ||| |||||||| ||||| || || ||||| | |||
Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750
Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387
|| |||| ||||||||| | ||||| | | | | || || | ||| | ||||||
Sbjct 749 TCTACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCAG 690
Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAA--ACA 16445
| | |||||| || |||| | | | || |||| | | || || |||| | |
Sbjct 689 TCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAAA 630
Query 16446 ATTTCTCT----------------------------TTTTC--CTGAATATCGATTATAT 16475
| || || ||||| | |||| || | || |
Sbjct 629 AAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTC--TGATGT 572
Query 16476 ACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATC 16535
| |||||||| || | | ||||||||| || ||||| ||||| || || || || | |
Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512
Query 16536 CATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCT 16595
|||| || || ||| | || | || || ||||| | ||| || || || || |
Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTT 452
Query 16596 CATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTT 16655
| || || || ||||| ||||| ||||| || | | || | || | |
Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392
Query 16656 CGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCG 16715
| | | |||| || ||||| || ||||| || | ||| ||||| ||| |
Sbjct 391 CTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTG 332
Query 16716 TCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAA 16775
|||| ||| |||||| || || ||||| | ||||||||| ||| || | |||||||
Sbjct 331 TCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAA 272
Query 16776 A 16776
|
Sbjct 271 A 271
>seq75644
Length=2520
Score = 152 bits (168), Expect = 5e-32
Identities = 580/904 (64%), Gaps = 45/904 (5%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||| || | ||| || || || |||||||| ||||| ||||| | || ||||| |
Sbjct 585 TTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATTCT 644
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTA-ACT 16030
||||||||||||||||||| ||| | ||||| ||| || || || ||| |
Sbjct 645 CCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTC-GTATAGC 703
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090
|| | ||| || |||||||| | || | ||||| | || || || || || || |||
Sbjct 704 AAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAGT 763
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
||| || | || | | || || | ||||||| | | || || || | |||
Sbjct 764 TTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAATATA 823
Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGG---TGTTTAAACATTAGACACGCG 16207
| | ||| | | ||| | | || | | ||||| |||| || || ||
Sbjct 824 GCATAAACACGTTCCTTAT-CGGGCTTT--TTCACGATATGTTTGAACAGAAGGCAAGCA 880
Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267
|||||| || || |||||||| | || |||||||| ||| || || || ||||||
Sbjct 881 AAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGC 940
Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327
|| || || ||||| | ||| ||||| | ||||| || |||||||| | ||
Sbjct 941 ATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCT 1000
Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387
|| | | ||||| || | || || || |||| | | | ||| || ||||||
Sbjct 1001 TCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCCAG 1060
Query 16388 TTCTGTACCCATT-CGGCTTTTTGTTTTATACAATCCATCGTTTCT-ATGGCCTTAAACA 16445
| | |||| | || |||||||| | | |||||| | |||| | ||||| |||||||
Sbjct 1061 TCAAGGGCCCACTGCGCCTTTTTGTGT-ACACAATCGAG-GTTTGTGATGGCATTAAACA 1118
Query 16446 ATT--TCTCT---------------------------TTTTCC--TGAATATCGATTATA 16474
| ||||| |||||| || || ||| ||||
Sbjct 1119 AGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATATA 1178
Query 16475 TACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAAT 16534
| ||||||||||| | || ||||| || ||||| || || ||||| || ||||| |
Sbjct 1179 T--GTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATG 1236
Query 16535 CCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTC 16594
|| || |||||||| |||| | || ||| ||||| ||| |||||| |||| ||
Sbjct 1237 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTT 1296
Query 16595 TCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTT 16654
|| ||| || || ||||| ||||| || || || | | || | || |||| |
Sbjct 1297 TCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGC 1356
Query 16655 TCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGC 16714
|| | | |||| || ||| | | |||||||| | ||| || |||||
Sbjct 1357 TCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACT 1416
Query 16715 GTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGA 16774
| ||| || ||| || |||||||| || | || ||| ||||| ||||| || ||
Sbjct 1417 GACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGC 1476
Query 16775 AATA 16778
||||
Sbjct 1477 AATA 1480
>seq110960
Length=1818
Score = 141 bits (156), Expect = 9e-29
Identities = 578/905 (64%), Gaps = 46/905 (5%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||| || | ||| || || || |||||||| ||||| ||||| | || ||||| |
Sbjct 1234 TTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATTCT 1175
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTA-ACT 16030
||||||||||||||||||| ||| | ||||| ||| || || || ||| |
Sbjct 1174 CCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTC-GTACAGC 1116
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090
|| | ||| || |||||||| | || | ||||| | || || || || || || |||
Sbjct 1115 AAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAGT 1056
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
|| || | || | | || || | ||||||| | | || || || | |||
Sbjct 1055 TTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAATATA 996
Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGG---TGTTTAAACATTAGACACGCG 16207
| | ||| | | ||| | | || | | ||||| |||| || || ||
Sbjct 995 GCATAAACACGTTCCTTAT-CGGGCTTT--TTCACGATATGTTTGAACAGAAGGCAAGCA 939
Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267
|||||| || || |||||||| | || |||||||| ||| || || || ||||||
Sbjct 938 AAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGC 879
Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327
|| || || ||||| | ||| ||||| | ||||| || |||||||| | ||
Sbjct 878 ATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCT 819
Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387
|| | | ||||| || | || || || |||| | | | ||| || ||||||
Sbjct 818 TCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCCAG 759
Query 16388 TTCTGTACCCATT-CGGCTTTTTGTTTTATACAATCCATCGTTTCT-ATGGCCTTAAACA 16445
| | |||| | || |||||||| | | |||||| | ||| | ||||| |||||||
Sbjct 758 TCAAGGGCCCACTGCGCCTTTTTGTGT-ACACAATCGAG-GTTCGTGATGGCATTAAACA 701
Query 16446 ATT--TCTCT----------------------------TTTTCC--TGAATATCGATTAT 16473
| ||||| |||||| || || ||| ||
Sbjct 700 AGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGG--AT 643
Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533
||||||||||||||| | || ||||| || || || || || ||||| || ||||| |
Sbjct 642 ATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCAT 583
Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593
|| || |||||||| |||| | || ||| ||||| ||| |||||| |||| ||
Sbjct 582 GCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATT 523
Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTT 16653
|| ||| || || ||||| ||||| || || || | | || | || |||| |
Sbjct 522 TTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCG 463
Query 16654 TTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGG 16713
|| | | |||| || ||| | | |||||||| | ||| || |||||
Sbjct 462 CTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAAC 403
Query 16714 CGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGG 16773
| ||| || ||| || |||||||| || | || ||| ||||| ||||| || ||
Sbjct 402 TGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 343
Query 16774 AAATA 16778
||||
Sbjct 342 CAATA 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509391768833360
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