Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq72706 107 2e-18 >seq72706 Length=2596 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||| ||||| || ||||||||||| ||| | ||||||||||| ||| |||| |||| || Sbjct 2275 GGGTCTTGGCGTGCCGTTCAACATCGCTAGCTATGCACTTCTGACCCACATGATAGCCCA 2334 Query 19121 TGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTT 19180 |||||| ||| | |||| || || || |||| || ||||||||| | ||||| || || Sbjct 2335 TGTTACTGGATTGGAAACTGGGGAATTTGTTCACACTATGGGGGATACTCATATCTATTT 2394 Query 19181 GAATCATATAGATGCTTTAAAA 19202 ||||| | || ||| | ||| Sbjct 2395 AAATCACAGTGAAGCTCTCAAA 2416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397963472375910