Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq75644 230 3e-55 seq150668 224 1e-53 seq110960 224 1e-53 seq93010 188 8e-43 >seq75644 Length=2520 Score = 230 bits (254), Expect = 3e-55 Identities = 611/929 (66%), Gaps = 42/929 (5%) Strand=Plus/Plus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGAT--TCT 23941 | || || | || ||||| ||||| ||||| | ||||| | |||| | || ||| Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 ||| || | || | | ||| | ||| || ||||| || | || |||||| Sbjct 684 CGTAA--CCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCAT 741 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAA 24060 ||||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| | Sbjct 742 ATCACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTA 800 Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 24120 | | || || | | |||| || ||| | | || | || | || Sbjct 801 TCTCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATAT 860 Query 24121 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 24180 |||| |||| | || || || ||| ||| || || ||||| | |||||| | ||| | Sbjct 861 GTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCAT 920 Query 24181 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 24240 || || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 921 TGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAAC 980 Query 24241 ATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC-- 24298 || |||||||| | |||||| | ||| |||||||| || | || || ||| Sbjct 981 TGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTT 1039 Query 24299 GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA------ 24350 | | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 1040 GACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGG 1099 Query 24351 --------GGCATTG---------TCTCTA-------TAGCATTAAAGAGATAGtttttt 24386 |||||| |||||| ||| ||||| | | | |||| Sbjct 1100 TTTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTT 1159 Query 24387 tCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTT 24446 || | |||| | |||||||||||||| ||||| |||||| ||||| ||||| ||| Sbjct 1160 CCACTGG-ATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTT 1218 Query 24447 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAA 24506 || || ||||| || | ||||| || |||| |||||| | || |||||| || | Sbjct 1219 TCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTA 1278 Query 24507 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 24566 || ||||| | | |||||| ||| ||||| |||||||| || || || || | || Sbjct 1279 AACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACG 1338 Query 24567 TGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGAT 24626 | |||||||| | || |||| | ||| || ||| | || ||||| || Sbjct 1339 TACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGAC 1398 Query 24627 ATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 24686 | ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| Sbjct 1399 AAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATA 1458 Query 24687 TCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||||| ||||| || || ||||| Sbjct 1459 TCCGGATATTGGATTGGCAATATCACAAA 1487 >seq150668 Length=1318 Score = 224 bits (248), Expect = 1e-53 Identities = 614/926 (66%), Gaps = 57/926 (6%) Strand=Plus/Minus Query 23847 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCC 23906 |||||||| || || || || ||||||||||| ||||| || || | |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 23907 ATGAAATCGGATGGATTGGTAACATTATAGAT--TCTTTTAAATCCCAATTCAGAAATCA 23964 || ||||| | ||||| || | || |||| ||| || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAA--CCAAGTTCAGACAGAA 1046 Query 23965 ATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 24024 | ||| || |||||||| || || ||| | | |||||||| || || || Sbjct 1045 GACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGAC 986 Query 24025 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTG---TTATA- 24080 | || || | ||| |||| ||||||||||| ||||| || || || ||||| Sbjct 985 TGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAG 926 Query 24081 -ATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATG 24138 || |||| | || | ||||| |||| | |||| | ||| ||||| | | || | Sbjct 925 AATGGATCCT-CT-TCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAG 872 Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198 |||||||||| || || ||||| |||| ||| || | || ||| || ||||| |||| Sbjct 871 CGAAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGG 812 Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258 |||| || ||||||||||||||||||||||| | ||||| || || ||||||| | Sbjct 811 GCATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACAC 752 Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGTCATGT---A 24312 ||||||| || ||||| || | | ||| | || || | ||| || | | Sbjct 751 CTTCTACAGCTGCAAAAGCTGCGACACGTTC-AGAGAA-TGGAGAATTTGT-ATCTCCAA 695 Query 24313 TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTAC-----ACAAG---------GCATT-- 24356 |||| | ||||||| | ||||| ||| | || |||| ||||| Sbjct 694 TCCAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAA 635 Query 24357 -------GTCTCTATAGCATTAAAGAGATA-------GtttttttCATTACTATCTTTAA 24402 ||| ||| | | ||||| ||| | |||||| | |||| | | Sbjct 634 GCAAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGA 575 Query 24403 CATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAA 24462 || |||||||| | |||| |||||||| ||||| || || ||||| || ||||| | Sbjct 574 TGTAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTA 515 Query 24463 ATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAA-A 24521 || || ||||| | | | || | ||||| |||||| | ||| || || | ||| | Sbjct 514 TGCCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGA 456 Query 24522 TTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 24581 ||||| ||||| || ||||| || || ||||| || | || | || ||| | Sbjct 455 TTTTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGT 396 Query 24582 TTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCC 24641 || | || | ||| |||||||| | | |||||||| | ||| ||||| || Sbjct 395 CGCTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCT 336 Query 24642 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATT 24701 |||||||| || || ||| | || || ||||| | ||||| |||||| |||| | ||| Sbjct 335 ACTGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATG 276 Query 24702 GGAAAAATAACAAATCTATTTGGATT 24727 ||||| || ||||| | ||||||| Sbjct 275 GGAAACATTACAAAGCGCCTTGGATT 250 >seq110960 Length=1818 Score = 224 bits (248), Expect = 1e-53 Identities = 610/930 (66%), Gaps = 43/930 (5%) Strand=Plus/Minus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGAT--TCT 23941 | || || | || ||||| ||||| ||||| | ||||| | |||| | || ||| Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 ||| || | || | | ||| | ||| || ||||| || | || |||||| Sbjct 1135 CGTAA--CCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCAT 1078 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAA 24060 ||||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| | Sbjct 1077 ATCACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTA 1019 Query 24061 TAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAAT 24120 | | || || | | |||| || ||| | | || | || | || Sbjct 1018 TCTCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATAT 959 Query 24121 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 24180 |||| |||| | || || || ||| ||| || || ||||| | |||||| | ||| | Sbjct 958 GTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCAT 899 Query 24181 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 24240 || || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 898 TGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAAC 839 Query 24241 ATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACC-- 24298 || |||||||| | |||||| | ||| |||||||| || | || || ||| Sbjct 838 TGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTT 780 Query 24299 GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA------ 24350 | | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 779 GACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGG 720 Query 24351 --------GGCATTG---------TCTCTA--------TAGCATTAAAGAGATAGttttt 24385 |||||| |||||| ||| ||||| | | | ||| Sbjct 719 TTCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTT 660 Query 24386 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 24445 | || | |||| | ||| |||||||||| ||||| |||||| ||||||||||| || Sbjct 659 TCCACTGG-ATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATT 601 Query 24446 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACA 24505 ||| || ||||| || | ||||| || |||| |||||| | || |||||| || Sbjct 600 TTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACT 541 Query 24506 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 24565 ||| ||||| | | |||||| ||| ||||| |||||||| || || || || | || Sbjct 540 AAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAAC 481 Query 24566 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGA 24625 | |||||||| | || |||| | ||| || ||| | || ||||| || Sbjct 480 GTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGA 421 Query 24626 TATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685 | ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| Sbjct 420 CAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGAT 361 Query 24686 GTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||||| ||||| || || || || Sbjct 360 ATCCGGATATTGGATTGGCAATATCACGAA 331 >seq93010 Length=2134 Score = 188 bits (208), Expect = 8e-43 Identities = 439/656 (67%), Gaps = 6/656 (1%) Strand=Plus/Minus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 ||||||||||| | |||| ||| | ||| || || | | ||| || || |||| Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || ||||| || |||||||| || ||| ||||| || | | | || || || Sbjct 734 AACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCA 675 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 || ||||| | || | ||| | | ||| || | |||||| || || | || ||| Sbjct 674 GTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | ||||||| |||| || |||||||| | ||| | ||| || || ||| || Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | |||||||| | || |||||||| |||||| || || | |||||| | ||| Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCA 495 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 || | || || | || || ||| || ||||| || ||||||| || | || Sbjct 494 GTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCA 435 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 ||| | | |||||||| |||||||| || || |||||| |||| | | |||||| Sbjct 434 CATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAA 375 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 ||||| ||||| ||| | | || || | |||||| | || || |||||||| ||| Sbjct 374 CAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTA 315 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAG-CTGAGTCTATATC-CCATTGAT 54518 ||||| || || | | ||||| || || | || ||| ||||| || || | | Sbjct 314 AACCACTTCAAGGACATCAAGTTGTAGGTTTC-ACAGACTGCCTCTATGTCATCAAAG-T 257 Query 54519 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 54578 |||| || | || ||| | ||| | ||| |||||||| | |||| | || || | | Sbjct 256 GAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGA 197 Query 54579 TTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 54632 |||| || | || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 196 TTTTAAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 53420 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 53479 ||||||||||| || || | ||| | |||||||| | || ||||| ||||||||| Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 53480 TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 53539 || ||| || ||| ||||| || || | | ||||| || |||||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 53540 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 53577 |||||||| |||||||| |||| || | | |||| || Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591373445915040