Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq157544 120 3e-22
seq40145 95.1 1e-14
>seq157544
Length=1252
Score = 120 bits (132), Expect = 3e-22
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||||||||| ||||| || | |||||| || | || |||||||| || || || ||
Sbjct 1223 TCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCTAGCTGTTTGCCTGCAAAA 1164
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| || |||||||| || | || | || |||||| ||| ||| |||| | ||| | |
Sbjct 1163 ATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCC-TGAATTTTAGCTTTCACATT 1105
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||| |||||||| || || |||| ||||| || || || || || ||||||||
Sbjct 1104 CTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTTCCAGTAAGGGTCTTTAC 1045
Query 43172 AAAGATTTGCAT--TTTTA 43188
|| |||||||| |||||
Sbjct 1044 GAATATTTGCATCGTTTTA 1026
>seq40145
Length=3774
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1227 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1168
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 1167 TACTAACGAGGACTG 1153
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2462 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2403
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 2402 TACTAACGAGGACTG 2388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569556075687440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |