Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 93.3 4e-14
seq32333 93.3 4e-14
>seq171037
Length=1136
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890
||||||||| ||||||||||| | || ||||| || || || | || |||||||| ||
Sbjct 788 CATGCAGATTTTTGTTAAAACTCTGACGGGCAAGACAATTACTTTGGAAGTCGAATCAAG 847
Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950
|||| || |||| | || | ||||| | |||||||| | || ||||||
Sbjct 848 TGACACAGTGGAAAACATCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCCCCTGACCA 907
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGA 24986
|||||| ||||| | ||| || |||||||| |||||
Sbjct 908 GCAACGATTAATTTTTGCCGGAAAACAACTAGAAGA 943
>seq32333
Length=4216
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890
||||||||| ||||||||||| | || ||||| || || || | || |||||||| ||
Sbjct 3988 CATGCAGATTTTTGTTAAAACTCTGACGGGCAAGACAATTACTTTGGAAGTCGAATCAAG 3929
Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950
|||| || |||| | || | ||||| | |||||||| | || ||||||
Sbjct 3928 TGACACAGTGGAAAACATCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCCCCTGACCA 3869
Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGA 24986
|||||| ||||| | ||| || |||||||| |||||
Sbjct 3868 GCAACGATTAATTTTTGCCGGAAAACAACTAGAAGA 3833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 416690977684160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |