Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq75644 259 6e-64 seq110960 251 9e-62 seq150668 221 2e-52 seq93010 185 1e-41 >seq75644 Length=2520 Score = 259 bits (286), Expect = 6e-64 Identities = 625/933 (67%), Gaps = 50/933 (5%) Strand=Plus/Plus Query 33271 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33330 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 33331 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttt 33390 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 33391 tAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTT 33450 | || | || | | ||| | ||| || || ||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 33451 CACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATG 33509 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 33510 G---ATACCGCATTTGTTATA--ATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564 || || | || |||| ||||| ||| ||| | | |||| | | | Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAAC---ACG--TTCCTTA-TCGGGCTTTTTCACG 856 Query 33565 A-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 | |||||| |||| | || || || ||| ||| || || ||||| | |||||| | | Sbjct 857 ATATGTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGT 916 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || || || || | || ||||| ||||||||||| |||||||||||||| || || Sbjct 917 TCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCA 976 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743 || ||||||||||||| |||||| | |||||||||||| || | ||| || || Sbjct 977 AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AA 1035 Query 33744 CC--GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 | | | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 1036 CGTTGACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATC 1095 Query 33800 CATCGTTTCT-ATGGCATTAAAGA------------GATAGtt---ttt---------tt 33834 | |||| | ||||||||||| | || | || ||| | Sbjct 1096 GAG-GTTTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATA 1154 Query 33835 CATT---ACT--ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33889 | || ||| |||| | ||| ||||| |||| ||||| |||||| ||||| ||||| Sbjct 1155 CTTTTCCACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAAT 1214 Query 33890 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 33949 ||||| || |||||||| | ||||| || |||| |||||| | || |||||| Sbjct 1215 ATTTTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTG 1274 Query 33950 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAA 34009 || ||| ||||| | | |||||| ||| |||||||||||||| || || || || | Sbjct 1275 ACTAAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAG 1334 Query 34010 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 34069 || | |||||||| | || |||| | ||| || ||| | || ||||| Sbjct 1335 AACGTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTT 1394 Query 34070 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 34129 || | ||| || ||||| |||| ||| ||||| || | |||||||| || | | ||| Sbjct 1395 GGACAAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCA 1454 Query 34130 GATGTCATGATATTGGATTGGGAAAATAACAAA 34162 ||| || ||||||||||||| || || ||||| Sbjct 1455 GATATCCGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 251 bits (278), Expect = 9e-62 Identities = 623/934 (67%), Gaps = 51/934 (5%) Strand=Plus/Minus Query 33271 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33330 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 33331 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttt 33390 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 33391 tAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTT 33450 | || | || | | ||| | ||| || || ||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 33451 CACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATG 33509 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 33510 G---ATACCGCATTTGTTATA--ATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564 || || | || |||| ||||| ||| ||| | | |||| | | | Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAAC---ACG--TTCCTTA-TCGGGCTTTTTCACG 963 Query 33565 A-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 | |||||| |||| | || || || ||| ||| || || ||||| | |||||| | | Sbjct 962 ATATGTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGT 903 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || || || || | || ||||| ||||||||||| |||||||||||||| || || Sbjct 902 TCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCA 843 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743 || ||||||||||||| |||||| | |||||||||||| || | ||| || || Sbjct 842 AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AA 784 Query 33744 CC--GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 | | | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 783 CGTTGACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATC 724 Query 33800 CATCGTTTCT-ATGGCATTAAAGA------------GA-----TAGtttttttCAT---T 33838 | ||| | ||||||||||| | || ||| ||| || | Sbjct 723 GAG-GTTCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACAT 665 Query 33839 ACT----------ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33888 ||| |||| | ||| ||||| |||| ||||| |||||| |||||||||| Sbjct 664 ACTTTTCCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAA 605 Query 33889 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 33948 | ||||| || |||||||| | ||||| || |||| |||||| | || |||||| Sbjct 604 TATTTTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTT 545 Query 33949 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCA 34008 || ||| ||||| | | |||||| ||| |||||||||||||| || || || || | Sbjct 544 GACTAAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGA 485 Query 34009 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTT 34068 || | |||||||| | || |||| | ||| || ||| | || |||| Sbjct 484 GAACGTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTT 425 Query 34069 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 34128 | || | ||| || ||||| |||| ||| ||||| || | |||||||| || | | || Sbjct 424 TGGACAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCC 365 Query 34129 AGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 |||| || ||||||||||||| || || || || Sbjct 364 AGATATCCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 221 bits (244), Expect = 2e-52 Identities = 607/925 (66%), Gaps = 49/925 (5%) Strand=Plus/Minus Query 33294 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33353 |||||||| || || || || ||||||||||| ||||| || |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 33354 ATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAAT 33413 || |||||||||||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 33414 CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 33473 | ||| || || || ||||| || ||| | | |||||||| || ||||| | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 33474 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA-AA 33532 || || | ||| |||| ||||||||||| ||||| ||| || | || ||| || Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 33533 TCTAACGGTTTCTTCACT--CGGTGGATGTAAT-AAATGTTTAAACATCAAACATGCGAA 33589 | | | ||||| || |||| || ||| | ||| ||||| | | || ||||| Sbjct 923 TGGATC---CTCTTCTCTTCCGGT-TTTGCAATGATATGCTTAAATAGGAGGCAAGCGAA 868 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||||| ||||| ||||| |||| ||| || | || || || ||||| |||||||| Sbjct 867 ATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCAT 808 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || ||||||||||||||||||||||| | || || || || ||||| | ||||| Sbjct 807 AAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTC 748 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT---ATCCA 33763 ||| || ||||| || | | | | || | || | ||| || | ||||| Sbjct 747 TACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATCCA 691 Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA----- 33818 | ||||||| | ||||| ||| | || || || | | || |||||| Sbjct 690 GTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAA 631 Query 33819 ----------------AAGAGATA---------GtttttttCATTACTATCTTTAACATA 33853 || ||||| | |||||| | |||| | | || Sbjct 630 AAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTA 571 Query 33854 AGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCC 33913 |||||| || | |||| |||||||| ||||| || || ||||| || || || | || Sbjct 570 AGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCC 511 Query 33914 GTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAA-ATTTT 33972 || ||||| | | | || | ||||| |||||| | ||| || || | ||| ||||| Sbjct 510 ATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTTT 452 Query 33973 CATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 34032 | ||||| |||||||| || || ||||| || | || | || ||| | | Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392 Query 34033 CGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 34092 | | || | ||| |||||||| | | |||||||| | ||| ||||| || |||| Sbjct 391 CTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTG 332 Query 34093 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGA 34152 |||| || || ||| | || || ||||| | ||||| |||||| |||| | || || | Sbjct 331 TCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAA 272 Query 34153 AAATAACAAATCTATTTGGATTTGG 34177 | || ||||| | ||||||| || Sbjct 271 ACATTACAAAGCGCCTTGGATTGGG 247 >seq93010 Length=2134 Score = 185 bits (204), Expect = 1e-41 Identities = 437/654 (67%), Gaps = 6/654 (1%) Strand=Plus/Minus Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280 ||||||||| | |||| ||| | ||| || || | | ||| || || |||||| Sbjct 792 AGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATAAA 733 Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340 ||||| || |||||||| || ||| ||||| || | | | || || || || Sbjct 732 CAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCAGT 673 Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400 ||||| | || | ||| | | ||| || | |||||| || || | || ||||| Sbjct 672 GTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATGGC 613 Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460 | | ||||||| |||| || |||||||| | ||| | ||| || || ||| |||| Sbjct 612 AAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAAAC 553 Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520 | |||||||| | || || || || |||||| ||||| | |||||| ||| | Sbjct 552 ACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCAGT 493 Query 63521 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580 | | || || | || || ||| || ||||| || ||||||| || | || || Sbjct 492 GCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCACA 433 Query 63581 TCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640 | | | || ||||| ||||| || ||||| ||||| |||| | | |||||||| Sbjct 432 TTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAACA 373 Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700 ||| ||||| ||| | | | || || | |||||| | || || |||||||| ||||| Sbjct 372 GCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTAAA 313 Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63759 ||| || || | | ||||| || ||| ||| ||||| || || | |||| Sbjct 312 CCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG-TGAA 254 Query 63760 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819 | || | || ||| | ||| | ||| |||||||| | |||| || ||| || | |||| Sbjct 253 TACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGATTT 194 Query 63820 TCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63870 | || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 193 T-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 62658 AGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA 62717 |||| |||||| || || | ||| | |||||||| | |||||||| ||||||||| Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 62718 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCT 62777 || ||| || | ||| ||||| || || | | ||||| || || ||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 62778 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815 |||||||| |||||||| |||| || | | |||| || Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627326687137440