Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 259 6e-64
seq110960 251 9e-62
seq150668 221 2e-52
seq93010 185 1e-41
>seq75644
Length=2520
Score = 259 bits (286), Expect = 6e-64
Identities = 625/933 (67%), Gaps = 50/933 (5%)
Strand=Plus/Plus
Query 33271 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33330
|| ||||||||| | |||||||||||| || ||||| || || || || || ||||
Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623
Query 33331 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttt 33390
| || || | || ||||| ||||| |||||||| ||||| | |||| |||| || |
Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683
Query 33391 tAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTT 33450
| || | || | | ||| | ||| || || ||||| | || |||||| |
Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743
Query 33451 CACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATG 33509
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802
Query 33510 G---ATACCGCATTTGTTATA--ATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564
|| || | || |||| ||||| ||| ||| | | |||| | | |
Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAAC---ACG--TTCCTTA-TCGGGCTTTTTCACG 856
Query 33565 A-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623
| |||||| |||| | || || || ||| ||| || || ||||| | |||||| | |
Sbjct 857 ATATGTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGT 916
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
|| || || || | || ||||| ||||||||||| |||||||||||||| || ||
Sbjct 917 TCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCA 976
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743
|| ||||||||||||| |||||| | |||||||||||| || | ||| || ||
Sbjct 977 AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AA 1035
Query 33744 CC--GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799
| | | ||| || ||||| | | ||||| | ||||| || | |||||||
Sbjct 1036 CGTTGACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATC 1095
Query 33800 CATCGTTTCT-ATGGCATTAAAGA------------GATAGtt---ttt---------tt 33834
| |||| | ||||||||||| | || | || ||| |
Sbjct 1096 GAG-GTTTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATA 1154
Query 33835 CATT---ACT--ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33889
| || ||| |||| | ||| ||||| |||| ||||| |||||| ||||| |||||
Sbjct 1155 CTTTTCCACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAAT 1214
Query 33890 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 33949
||||| || |||||||| | ||||| || |||| |||||| | || ||||||
Sbjct 1215 ATTTTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTG 1274
Query 33950 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAA 34009
|| ||| ||||| | | |||||| ||| |||||||||||||| || || || || |
Sbjct 1275 ACTAAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAG 1334
Query 34010 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 34069
|| | |||||||| | || |||| | ||| || ||| | || |||||
Sbjct 1335 AACGTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTT 1394
Query 34070 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 34129
|| | ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||
Sbjct 1395 GGACAAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCA 1454
Query 34130 GATGTCATGATATTGGATTGGGAAAATAACAAA 34162
||| || ||||||||||||| || || |||||
Sbjct 1455 GATATCCGGATATTGGATTGGCAATATCACAAA 1487
>seq110960
Length=1818
Score = 251 bits (278), Expect = 9e-62
Identities = 623/934 (67%), Gaps = 51/934 (5%)
Strand=Plus/Minus
Query 33271 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33330
|| ||||||||| | |||||||||||| || ||||| || || || || || ||||
Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196
Query 33331 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttt 33390
| || || | || ||||| ||||| |||||||| ||||| | |||| |||| || |
Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136
Query 33391 tAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTT 33450
| || | || | | ||| | ||| || || ||||| | || |||||| |
Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076
Query 33451 CACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATG 33509
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017
Query 33510 G---ATACCGCATTTGTTATA--ATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564
|| || | || |||| ||||| ||| ||| | | |||| | | |
Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAAC---ACG--TTCCTTA-TCGGGCTTTTTCACG 963
Query 33565 A-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623
| |||||| |||| | || || || ||| ||| || || ||||| | |||||| | |
Sbjct 962 ATATGTTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGT 903
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
|| || || || | || ||||| ||||||||||| |||||||||||||| || ||
Sbjct 902 TCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCA 843
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA 33743
|| ||||||||||||| |||||| | |||||||||||| || | ||| || ||
Sbjct 842 AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AA 784
Query 33744 CC--GGCGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799
| | | ||| || ||||| | | ||||| | ||||| || | |||||||
Sbjct 783 CGTTGACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATC 724
Query 33800 CATCGTTTCT-ATGGCATTAAAGA------------GA-----TAGtttttttCAT---T 33838
| ||| | ||||||||||| | || ||| ||| || |
Sbjct 723 GAG-GTTCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACAT 665
Query 33839 ACT----------ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 33888
||| |||| | ||| ||||| |||| ||||| |||||| ||||||||||
Sbjct 664 ACTTTTCCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAA 605
Query 33889 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 33948
| ||||| || |||||||| | ||||| || |||| |||||| | || ||||||
Sbjct 604 TATTTTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTT 545
Query 33949 TACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCA 34008
|| ||| ||||| | | |||||| ||| |||||||||||||| || || || || |
Sbjct 544 GACTAAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGA 485
Query 34009 ATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTT 34068
|| | |||||||| | || |||| | ||| || ||| | || ||||
Sbjct 484 GAACGTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTT 425
Query 34069 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 34128
| || | ||| || ||||| |||| ||| ||||| || | |||||||| || | | ||
Sbjct 424 TGGACAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCC 365
Query 34129 AGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|||| || ||||||||||||| || || || ||
Sbjct 364 AGATATCCGGATATTGGATTGGCAATATCACGAA 331
>seq150668
Length=1318
Score = 221 bits (244), Expect = 2e-52
Identities = 607/925 (66%), Gaps = 49/925 (5%)
Strand=Plus/Minus
Query 33294 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33353
|||||||| || || || || ||||||||||| ||||| || |||| ||||||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 33354 ATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAAT 33413
|| |||||||||||||| || |||| || || | || | |||||| | |
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044
Query 33414 CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTA 33473
| ||| || || || ||||| || ||| | | |||||||| || ||||| |
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 33474 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA-AA 33532
|| || | ||| |||| ||||||||||| ||||| ||| || | || ||| ||
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 33533 TCTAACGGTTTCTTCACT--CGGTGGATGTAAT-AAATGTTTAAACATCAAACATGCGAA 33589
| | | ||||| || |||| || ||| | ||| ||||| | | || |||||
Sbjct 923 TGGATC---CTCTTCTCTTCCGGT-TTTGCAATGATATGCTTAAATAGGAGGCAAGCGAA 868
Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649
|||||| ||||| ||||| |||| ||| || | || || || ||||| ||||||||
Sbjct 867 ATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCAT 808
Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709
|| ||||||||||||||||||||||| | || || || || ||||| | |||||
Sbjct 807 AAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTC 748
Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT---ATCCA 33763
||| || ||||| || | | | | || | || | ||| || | |||||
Sbjct 747 TACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATCCA 691
Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA----- 33818
| ||||||| | ||||| ||| | || || || | | || ||||||
Sbjct 690 GTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAA 631
Query 33819 ----------------AAGAGATA---------GtttttttCATTACTATCTTTAACATA 33853
|| ||||| | |||||| | |||| | | ||
Sbjct 630 AAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTA 571
Query 33854 AGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCC 33913
|||||| || | |||| |||||||| ||||| || || ||||| || || || | ||
Sbjct 570 AGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCC 511
Query 33914 GTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAA-ATTTT 33972
|| ||||| | | | || | ||||| |||||| | ||| || || | ||| |||||
Sbjct 510 ATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTTT 452
Query 33973 CATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 34032
| ||||| |||||||| || || ||||| || | || | || ||| | |
Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392
Query 34033 CGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 34092
| | || | ||| |||||||| | | |||||||| | ||| ||||| || ||||
Sbjct 391 CTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTG 332
Query 34093 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGA 34152
|||| || || ||| | || || ||||| | ||||| |||||| |||| | || || |
Sbjct 331 TCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAA 272
Query 34153 AAATAACAAATCTATTTGGATTTGG 34177
| || ||||| | ||||||| ||
Sbjct 271 ACATTACAAAGCGCCTTGGATTGGG 247
>seq93010
Length=2134
Score = 185 bits (204), Expect = 1e-41
Identities = 437/654 (67%), Gaps = 6/654 (1%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||||||||| | |||| ||| | ||| || || | | ||| || || ||||||
Sbjct 792 AGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATAAA 733
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
||||| || |||||||| || ||| ||||| || | | | || || || ||
Sbjct 732 CAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCAGT 673
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| | || | ||| | | ||| || | |||||| || || | || |||||
Sbjct 672 GTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATGGC 613
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | ||||||| |||| || |||||||| | ||| | ||| || || ||| ||||
Sbjct 612 AAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAAAC 553
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| |||||||| | || || || || |||||| ||||| | |||||| ||| |
Sbjct 552 ACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCAGT 493
Query 63521 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63580
| | || || | || || ||| || ||||| || ||||||| || | || ||
Sbjct 492 GCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCACA 433
Query 63581 TCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63640
| | | || ||||| ||||| || ||||| ||||| |||| | | ||||||||
Sbjct 432 TTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAACA 373
Query 63641 GCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63700
||| ||||| ||| | | | || || | |||||| | || || |||||||| |||||
Sbjct 372 GCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTAAA 313
Query 63701 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63759
||| || || | | ||||| || ||| ||| ||||| || || | ||||
Sbjct 312 CCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG-TGAA 254
Query 63760 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819
| || | || ||| | ||| | ||| |||||||| | |||| || ||| || | ||||
Sbjct 253 TACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGATTT 194
Query 63820 TCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63870
| || ||| || || | ||||| || ||||| ||||| || ||||| |||||
Sbjct 193 T-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 62658 AGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA 62717
|||| |||||| || || | ||| | |||||||| | |||||||| |||||||||
Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379
Query 62718 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCT 62777
|| ||| || | ||| ||||| || || | | ||||| || || ||||| |||
Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319
Query 62778 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62815
|||||||| |||||||| |||| || | | |||| ||
Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627326687137440
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