Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq75644 250 3e-61 seq110960 242 5e-59 seq150668 230 3e-55 seq93010 183 4e-41 >seq75644 Length=2520 Score = 250 bits (276), Expect = 3e-61 Identities = 614/928 (66%), Gaps = 40/928 (4%) Strand=Plus/Plus Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966 | || || | || ||||| ||||| ||||| || ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 36085 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 36086 GAGACCGCGTCTGTTATAATAG-ATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 | || || | | |||| ||| ||| ||| | | | | || | ||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTT-CACGATATG 861 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 ||| |||| | || || || ||| ||| || || ||||| | |||||| | ||| || Sbjct 862 TTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATT 921 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 | || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 922 GCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACT 981 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 36324 || |||||||| | |||||| | ||| |||||||| || | ||| || ||| Sbjct 982 GCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTG 1040 Query 36325 ACTGT----CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA------- 36373 ||| | || ||||| | | ||||| | ||||| || | ||||||| Sbjct 1041 ACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGT 1100 Query 36374 -------GGCATTG---------TCTCTA-------TAGCATTAAAGAGATAGttttttt 36410 |||||| |||||| ||| ||||| | | | |||| Sbjct 1101 TTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTC 1160 Query 36411 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 36470 || | |||| | |||||||||||||| ||||| |||||| ||||| ||||| |||| Sbjct 1161 CACTGG-ATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTT 1219 Query 36471 CAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAA 36530 | || ||||| || | ||||| || |||| |||||| | || |||||| || || Sbjct 1220 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 1279 Query 36531 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 36590 | ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 1280 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 1339 Query 36591 GTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 36650 |||||||| | || ||| | ||| || ||| | || ||||| || | Sbjct 1340 ACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACA 1399 Query 36651 TATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGT 36710 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| | Sbjct 1400 AATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATAT 1459 Query 36711 CATGATATTGAATTGGAAAAATAACAAA 36738 | ||||||| ||||| || || ||||| Sbjct 1460 CCGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 242 bits (268), Expect = 5e-59 Identities = 613/929 (66%), Gaps = 41/929 (4%) Strand=Plus/Minus Query 35847 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 35906 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 35907 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttt 35966 | || || | || ||||| ||||| ||||| || ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 35967 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 36026 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 36027 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 36085 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 36086 GAGACCGCGTCTGTTATAATAG-ATATTACTGTTTCTTCACTCGGTGGATACAATAAATG 36144 | || || | | |||| ||| ||| ||| | | | | || | ||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTT-CACGATATG 958 Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 ||| |||| | || || || ||| ||| || || ||||| | |||||| | ||| || Sbjct 957 TTTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATT 898 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 | || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 897 GCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACT 838 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 36324 || |||||||| | |||||| | ||| |||||||| || | ||| || ||| Sbjct 837 GCCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTG 779 Query 36325 ACTGT----CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA------- 36373 ||| | || ||||| | | ||||| | ||||| || | ||||||| Sbjct 778 ACTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGT 719 Query 36374 -------GGCATTG---------TCTCTA--------TAGCATTAAAGAGATAGtttttt 36409 |||||| |||||| ||| ||||| | | | |||| Sbjct 718 TCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTT 659 Query 36410 tCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTT 36469 || | |||| | ||| |||||||||| ||||| |||||| ||||||||||| ||| Sbjct 658 CCACTGG-ATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTT 600 Query 36470 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 36529 || || ||||| || | ||||| || |||| |||||| | || |||||| || | Sbjct 599 TCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTA 540 Query 36530 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 36589 || ||||| | | |||||| ||| ||||| |||||||| || || || || | || Sbjct 539 AACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACG 480 Query 36590 TGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGAT 36649 | |||||||| | || ||| | ||| || ||| | || ||||| || Sbjct 479 TACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGAC 420 Query 36650 ATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATG 36709 | ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| Sbjct 419 AAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATA 360 Query 36710 TCATGATATTGAATTGGAAAAATAACAAA 36738 || ||||||| ||||| || || || || Sbjct 359 TCCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 230 bits (254), Expect = 3e-55 Identities = 603/910 (66%), Gaps = 49/910 (5%) Strand=Plus/Minus Query 35870 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCC 35929 |||||||| || || || || ||||||||||| ||||| || || | |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 35930 ATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 35989 || ||||| || ||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 35990 CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 36049 | ||| || ||||| ||||| || ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 36050 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGAT 36109 || || | ||| |||| ||||||||||| ||||| || || || || ||||| Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGA- 925 Query 36110 AT---TACTGTT-TCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCGA 36164 || | || || ||||| |||| | |||| | ||| ||||| | | || |||| Sbjct 924 ATGGATCCTCTTCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCGA 869 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 ||||||| || || ||||| |||| ||| || | || ||| || ||||| ||||||| Sbjct 868 AATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCA 809 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | || ||||||||||||||||||||||| | ||||| || || ||||||| |||| Sbjct 808 TAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTT 749 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTC-CATAACCG-GCACTGTCATGT---ATCCA 36339 |||| || ||||| || | | | | || | || | | | | || | ||||| Sbjct 748 CTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCA 691 Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTAC-----ACAAG---------GCATT------ 36379 | ||||||| | ||||| ||| | || |||| ||||| Sbjct 690 GTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAA 631 Query 36380 ---GTCTCTATAGCATTAAAGAGATA-------GtttttttCATTACTATCTTTAACATA 36429 ||| ||| | | ||||| ||| | |||||| | |||| | | || Sbjct 630 AAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTA 571 Query 36430 TGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCC 36489 |||||||| | |||| |||||||| ||||| || || ||||| || ||||| | || Sbjct 570 AGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCC 511 Query 36490 GTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA-ATTTT 36548 || ||||| | | | || | ||||| |||||| | ||| || || | ||| ||||| Sbjct 510 ATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTTT 452 Query 36549 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 36608 | ||||| || ||||| || || ||||| || | || | || ||| | | Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392 Query 36609 CGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 36668 | || | ||| |||||||| | | |||||||| | ||| ||||| || |||| Sbjct 391 CTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTG 332 Query 36669 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAA 36728 |||| || || ||| | || || ||||| | ||||| |||||| |||| | ||| |||| Sbjct 331 TCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAA 272 Query 36729 AAATAACAAA 36738 | || ||||| Sbjct 271 ACATTACAAA 262 >seq93010 Length=2134 Score = 183 bits (202), Expect = 4e-41 Identities = 440/657 (67%), Gaps = 8/657 (1%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||||||||| | |||| ||| | ||| || || | | ||| || || |||| Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAA-ATCTCTGGTTCTATGTTCCTCGTTTCC 66130 || ||||| || |||||||| || ||||| || ||| || | | | || || || Sbjct 734 AACAGATCGGGGATCCAAAGGGC-ATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACC 676 Query 66131 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATAT 66190 || ||||| | || | ||| | | ||| || |||||| || || | || || Sbjct 675 AGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGAT 616 Query 66191 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 66250 ||| | | ||||||| |||| || |||||||| | ||| | ||| || || ||| | Sbjct 615 GGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAA 556 Query 66251 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 66310 ||| | |||||||| | || |||||||| |||||| || || | |||||| | || Sbjct 555 AACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACC 496 Query 66311 ACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370 | | | || || | || || ||| || ||||| || ||||||| || | || Sbjct 495 AGTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGC 436 Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 ||| | | |||||||| |||||||| || || |||||| |||| | | ||||| Sbjct 435 ACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAA 376 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 |||||| ||||| ||| | | || || | |||||| | || || |||||||| || Sbjct 375 ACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGT 316 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGAT 66549 |||||| || || | | ||||| || ||| ||| ||||| || || | | Sbjct 315 AAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG-T 257 Query 66550 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTA 66609 |||| || | || ||| | ||| | ||| |||||||| | |||| | || || | | Sbjct 256 GAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGA 197 Query 66610 TTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 66663 |||| || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 196 TTTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 65451 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 65510 ||||||||||| || || | ||| | |||||||| | || ||||| ||||||||| Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 65511 TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 65570 || ||| || ||| ||||| || || | | ||||| || |||||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 65571 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 65608 |||||||| |||||||| |||| || | | |||| || Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655569743030320