Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq75644 273 3e-68 seq110960 266 5e-66 seq150668 246 4e-60 seq93010 197 2e-45 >seq75644 Length=2520 Score = 273 bits (302), Expect = 3e-68 Identities = 621/927 (67%), Gaps = 38/927 (4%) Strand=Plus/Plus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAA-GAAATTCTTGTTCAATG 49887 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 49888 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 49947 | || || | | |||| ||| ||| | | || | || | |||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862 Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || |||| | || || || ||| ||| || || ||||| | |||||| ||||| ||| Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC--TGG 50125 || |||||||||| |||||| | ||| |||||||| ||| | ||| || ||| || Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041 Query 50126 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG-GT 1100 Query 50184 TTCT-ATGGCATTAAAGA------------GATAGtt---ttt---------ttCATT-- 50216 || | ||||||||||| | || | || ||| | | || Sbjct 1101 TTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTC 1160 Query 50217 -ACT--ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTC 50273 ||| |||| | ||| ||||| |||| ||||| |||||| ||||| ||||| ||||| Sbjct 1161 CACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220 Query 50274 AATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAA 50333 || |||||||| | ||||| || |||| |||||| | || |||||| || ||| Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280 Query 50334 TCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 50393 ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340 Query 50394 TTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATAT 50453 |||||||||| || || | ||| || ||| | || ||||| || | Sbjct 1341 CGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAA 1400 Query 50454 ATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 50513 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| || Sbjct 1401 ATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATC 1460 Query 50514 ATGATATTGGATTGGGAAAATAACAAA 50540 ||||||||||||| || || ||||| Sbjct 1461 CGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 266 bits (294), Expect = 5e-66 Identities = 619/928 (67%), Gaps = 39/928 (4%) Strand=Plus/Minus Query 49649 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 49708 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 49709 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 49768 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 49769 tAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTT 49828 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 49829 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAA-GAAATTCTTGTTCAATG 49887 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 49888 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 49947 | || || | | |||| ||| ||| | | || | || | |||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957 Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || |||| | || || || ||| ||| || || ||||| | |||||| ||||| ||| Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC--TGG 50125 || |||||||||| |||||| | ||| |||||||| ||| | ||| || ||| || Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778 Query 50126 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 | ||| || ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG-GT 719 Query 50184 TTCT-ATGGCATTAAAGA------------GA-----TAGtttttttCAT---TACT--- 50219 | | ||||||||||| | || ||| ||| || |||| Sbjct 718 TCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTT 659 Query 50220 -------ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 50272 |||| | ||| ||||| |||| ||||| |||||| ||||||||||| |||| Sbjct 658 CCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599 Query 50273 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAA 50332 | || |||||||| | ||||| || |||| |||||| | || |||||| || || Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539 Query 50333 ATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 50392 | ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479 Query 50393 GTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 50452 |||||||||| || || | ||| || ||| | || ||||| || | Sbjct 478 ACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACA 419 Query 50453 TATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGT 50512 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| | Sbjct 418 AATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATAT 359 Query 50513 CATGATATTGGATTGGGAAAATAACAAA 50540 | ||||||||||||| || || || || Sbjct 358 CCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 246 bits (272), Expect = 4e-60 Identities = 613/926 (66%), Gaps = 51/926 (6%) Strand=Plus/Minus Query 49672 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 49731 |||||||| || || || || ||||||||||| ||||| || |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 49732 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 49791 || |||||||||||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 49792 CTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 49851 | ||| || ||||| ||||| || ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 49852 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 49911 || || | ||| |||| ||||||||||| ||||| ||| || || || ||||| Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGA- 925 Query 49912 CTAACGGTT--TCTTCACT--CGGTGGATGCAATAA-ATGTTTAAACATCAAACATGCGA 49966 | || | ||||| || |||| |||||| | ||| ||||| | | || |||| Sbjct 924 ---ATGGATCCTCTTCTCTTCCGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCGA 869 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 ||||||| ||||| ||||| |||| ||| || || || ||| || ||||| ||||||| Sbjct 868 AATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCA 809 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTT 50086 | || ||||||||||||||||||||||| | ||||| || || ||||| | |||| Sbjct 808 TAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTT 749 Query 50087 CTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGT---ATCC 50140 |||| || ||||| || | | | | || | ||| | ||| || | |||| Sbjct 748 CTACAGCTGCAAAAGCTGC--GACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATCC 692 Query 50141 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA---- 50196 | | ||||||| | ||||| ||| | || || || | | || |||||| Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632 Query 50197 -----------------AAGAGATA---------GtttttttCATTACTATCTTTAACAT 50230 || ||||| | |||||| | |||| | | | Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572 Query 50231 AAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATC 50290 ||||||| || | |||| |||||||| ||||| || || ||||| || || || | | Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512 Query 50291 CGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAA-ATTT 50349 | || ||||| | | | || | ||||| |||||| | ||| || || | ||| |||| Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTT 453 Query 50350 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTT 50409 || ||||| || ||||| || || ||||| || | || | || ||| || Sbjct 452 TCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGC 393 Query 50410 TCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 50469 || || | ||| |||||||| | | |||||||| | ||| ||||| || ||| Sbjct 392 TCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACT 333 Query 50470 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGG 50529 ||||| || || ||| | || || ||||| | ||||| |||||| |||| | || || Sbjct 332 GTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGA 273 Query 50530 AAAATAACAAATCTATTTGGATTTGG 50555 || || ||||| | ||||||| || Sbjct 272 AACATTACAAAGCGCCTTGGATTGGG 247 >seq93010 Length=2134 Score = 197 bits (218), Expect = 2e-45 Identities = 441/656 (67%), Gaps = 6/656 (1%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 ||||||||||||| ||| ||| | ||| || |||| | ||| || || |||| Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || ||||| || |||||||| || ||| ||||| || | | | ||| || || Sbjct 734 AACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCA 675 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 || ||||| | || | ||| | | ||| || | |||||| || || | || ||| Sbjct 674 GTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || | |||| || |||||||| | ||| | ||| || || ||| || Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | |||||||| | || |||||||| |||||| || || | |||||| | ||| Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCA 495 Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 || | || || | || || ||| || ||||| || ||||||| || | || Sbjct 494 GTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCA 435 Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310 ||| | | |||||||| |||||||| ||||| ||||| |||| | | |||||| Sbjct 434 CATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAA 375 Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370 ||||| ||||| ||| | | || || | |||||| | || || |||||||| ||| Sbjct 374 CAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTA 315 Query 80371 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATG 80429 ||||| || |||| | ||||| || ||| ||| ||||| || || | || Sbjct 314 AACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG-TG 256 Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489 ||| || | | ||| | ||| | ||| |||||||| | |||| | || |||| || Sbjct 255 AATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGAT 196 Query 80490 TTTCAACAAG-TAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 80542 ||| || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 195 TTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715428064852720