Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 109 4e-19
seq32333 109 4e-19
>seq171037
Length=1136
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| | ||||||| ||||| || | ||| || || || | ||| ||||||||
Sbjct 1016 GCCTCCCCTGAGTCTTAGCACCAGGTGCAAAGTAGATTCTTTCTGAATATTATAATCGGA 957
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|||||||| ||| || | |||||| ||||||||||| ||||| || || || | ||
Sbjct 956 TAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAAATTAATCGTTGCTGGTCAGGGGG 897
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| |||||||| || ||| |||||| | | |||||||| | | |||||
Sbjct 896 AATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTTTTCCACTGTGTCACTTGATTCGAC 837
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || || || |||||||| |||||||| |||||
Sbjct 836 TTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAACAAAAATCTGCAT 789
>seq32333
Length=4216
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
|||||| | ||||||| ||||| || | ||| || || || | ||| ||||||||
Sbjct 3760 GCCTCCCCTGAGTCTTAGCACCAGGTGCAAAGTAGATTCTTTCTGAATATTATAATCGGA 3819
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
|||||||| ||| || | |||||| ||||||||||| ||||| || || || | ||
Sbjct 3820 TAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAAATTAATCGTTGCTGGTCAGGGGG 3879
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| |||||||| || ||| |||||| | | |||||||| | | |||||
Sbjct 3880 AATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTTTTCCACTGTGTCACTTGATTCGAC 3939
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || || || || || |||||||| |||||||| |||||
Sbjct 3940 TTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAACAAAAATCTGCAT 3987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379899000447084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |