Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq75644 246 4e-60 seq110960 235 7e-57 seq150668 201 2e-46 seq93010 199 5e-46 >seq75644 Length=2520 Score = 246 bits (272), Expect = 4e-60 Identities = 617/931 (66%), Gaps = 46/931 (5%) Strand=Plus/Plus Query 41754 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCT 41813 || ||||||||| | |||||||||||| || ||||| || || || || || || | Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 41814 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 41873 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 41874 tAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTT 41933 | || | || | | ||| | ||| || | ||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 41934 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 41992 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 42052 | || || | | |||| || ||| | | || | || | |||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862 Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || |||| | || || || ||| ||| || || || || | |||||| | ||| ||| Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || | || ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || |||||||||| |||||| | ||| |||||||| || | ||| || ||| | Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041 Query 42233 C----TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288 | | ||| ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGT 1100 Query 42289 TTCT-ATGGCATTAAA-GAGA---------------TAGtttttttCAT---TACT---- 42324 || | ||||||||||| ||| ||| ||| || |||| Sbjct 1101 TTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTC 1160 Query 42325 ------ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTC 42378 |||| | ||||||||| |||| ||||| |||||| || || ||||| ||||| Sbjct 1161 CACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220 Query 42379 AATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAA 42438 || |||||||| | ||||| || |||| | |||||| || || |||||| || ||| Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280 Query 42439 TCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 42498 ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340 Query 42499 TTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATATCTTTAG 42554 |||||||| | || ||| | |||| | ||| ||||| || ||||| | Sbjct 1341 CGATATAAAATGTCGCTC-TCCTGGCTTAAGTGCATCC---CATTGCACAATGTCTTTGG 1396 Query 42555 ATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGA 42614 | | ||| || ||||| || | ||| ||||| || | |||||||| || | | ||||| Sbjct 1397 ACAAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGA 1456 Query 42615 TATCATGATATTGAATTGGGAAAATAACAAA 42645 |||| ||||||| ||||| || || ||||| Sbjct 1457 TATCCGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 235 bits (260), Expect = 7e-57 Identities = 615/932 (66%), Gaps = 47/932 (5%) Strand=Plus/Minus Query 41754 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCT 41813 || ||||||||| | |||||||||||| || ||||| || || || || || || | Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 41814 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 41873 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 41874 tAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTT 41933 | || | || | | ||| | ||| || | ||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 41934 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 41992 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 42052 | || || | | |||| || ||| | | || | || | |||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957 Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || |||| | || || || ||| ||| || || || || | |||||| | ||| ||| Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || || | || ||||| ||||||||||| ||||||||||||||||||||||| Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || |||||||||| |||||| | ||| |||||||| || | ||| || ||| | Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778 Query 42233 C----TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288 | | ||| ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGT 719 Query 42289 TTCT-ATGGCATTAAA-GAGA----------------TAGtttttttCAT---TACT--- 42324 | | ||||||||||| ||| ||| ||| || |||| Sbjct 718 TCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTT 659 Query 42325 -------ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTT 42377 |||| | ||| ||||| |||| ||||| |||||| || |||||||| |||| Sbjct 658 CCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599 Query 42378 CAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAA 42437 | || |||||||| | ||||| || |||| | |||||| || || |||||| || || Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539 Query 42438 ATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 42497 | ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479 Query 42498 GTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATATCTTTA 42553 |||||||| | || ||| | |||| | ||| ||||| || ||||| Sbjct 478 ACGATATAAAATGTCGCTC-TCCTGGCTTAAGTGCATCC---CATTGCACAATGTCTTTG 423 Query 42554 GATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAG 42613 || | ||| || ||||| || | ||| ||||| || | |||||||| || | | |||| Sbjct 422 GACAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAG 363 Query 42614 ATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||||| ||||||| ||||| || || || || Sbjct 362 ATATCCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 201 bits (222), Expect = 2e-46 Identities = 605/926 (65%), Gaps = 51/926 (6%) Strand=Plus/Minus Query 41777 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCC 41836 |||||||| || || || || ||||||||||| || || || |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 41837 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 41896 || |||||||||||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 41897 CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 41956 | ||| || | || ||||| || ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 41957 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTG---TTATA--A 42011 || || | ||| |||| ||||||||||| ||||| || || || ||||| | Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCG 42070 | |||| | || | ||||| |||| | |||| | ||| ||||| | | || ||| Sbjct 923 TGGATCCT-CT-TCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCG 870 Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130 |||||||| ||||| |||||||||| ||| || | || ||| || ||||| |||||| Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810 Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190 || || ||||||||||||||||||||||| | ||||| || || ||||| | ||| Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750 Query 42191 TCTACTGCCGCAAAGGCAATAAGTCTCTCTC-CATAACCG-GCACTGTCATGT---ATCC 42245 ||||| || ||||| || | | | | || | || | | | | || | |||| Sbjct 749 TCTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCC 692 Query 42246 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA---- 42301 | | ||||||| | ||||| ||| | || || || | | || |||||| Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632 Query 42302 -----------------AAGAGATA---------GtttttttCATTACTATCTTTAACAT 42335 || ||||| | |||||| | |||| | | | Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572 Query 42336 ATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATC 42395 | ||||| || | |||| |||||||| ||||| || || ||||| || || || | | Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512 Query 42396 CGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAA-ATTT 42454 | || ||||| | | || | | ||| |||||| | ||| || || | ||| |||| Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTT 453 Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514 || ||||| || ||||| || || ||||| || | || | || ||| | Sbjct 452 TCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGC 393 Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574 || |||| | | | |||||||| | | |||||||| | ||| ||||| ||||| Sbjct 392 TCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACT 333 Query 42575 GTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGG 42634 ||||| || || || | || || ||||| | ||||| || ||| |||| | ||| || Sbjct 332 GTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGA 273 Query 42635 AAAATAACAAATCTATTTGGATTTGG 42660 || || ||||| | ||||||| || Sbjct 272 AACATTACAAAGCGCCTTGGATTGGG 247 >seq93010 Length=2134 Score = 199 bits (220), Expect = 5e-46 Identities = 444/658 (67%), Gaps = 10/658 (2%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||||||||| | |||| ||| | ||| || |||| | | | || || |||| Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || ||||| || |||||||| || ||| ||||| || | | | ||| || || Sbjct 734 AACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCA 675 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 || ||||| | || | ||| | | ||| || | |||||| || || | || ||| Sbjct 674 GTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || |||| |||| || |||||||| | ||| | ||| || || ||| || Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | |||||||| | || |||||||| |||||| || || | |||||| | ||| Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCA 495 Query 72274 CTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 || | || || | || ||| || ||| || ||||| || ||||||| || | | Sbjct 494 GTGCCGCGTATGCAATGAACATT--TACACCAATACCCCCAGCACTTTTAGAAATAAGGG 437 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 | ||| | | |||||||| |||||||| || || |||||| |||| | | |||| Sbjct 436 CACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAA 377 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 ||||||| ||||| ||| | | || || | |||||| | || || |||||||| | Sbjct 376 AACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAG 317 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGA 72510 ||||||| || |||| | ||||| || ||| ||| ||||| || || | Sbjct 316 TAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG- 258 Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570 || || || | | ||| | ||| | |||||||||||| | |||| | || |||| Sbjct 257 TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCG 198 Query 72571 ATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 72625 ||||| || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 197 ATTTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 71413 AGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGA 71472 ||||||||||| || || | || || |||||||| | || || || |||||| || Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 71473 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 71532 || ||| || | ||| ||||| || || | | ||||| || |||||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 71533 TGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571 ||||| || |||||||| |||| ||| | | |||| ||| Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGAA 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668484861242480