Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 246 4e-60
seq110960 235 7e-57
seq150668 201 2e-46
seq93010 199 5e-46
>seq75644
Length=2520
Score = 246 bits (272), Expect = 4e-60
Identities = 617/931 (66%), Gaps = 46/931 (5%)
Strand=Plus/Plus
Query 41754 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCT 41813
|| ||||||||| | |||||||||||| || ||||| || || || || || || |
Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623
Query 41814 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 41873
| || || | || ||||| ||||| |||||||| ||||| | |||| |||| || |
Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683
Query 41874 tAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTT 41933
| || | || | | ||| | ||| || | ||||| | || |||||| |
Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743
Query 41934 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 41992
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802
Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 42052
| || || | | |||| || ||| | | || | || | ||||
Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862
Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112
|| |||| | || || || ||| ||| || || || || | |||||| | ||| |||
Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922
Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172
|| || | || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982
Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232
|| |||||||||| |||||| | ||| |||||||| || | ||| || ||| |
Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041
Query 42233 C----TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288
| | ||| ||||| | | ||||| | ||||| || | ||||||| | ||
Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGT 1100
Query 42289 TTCT-ATGGCATTAAA-GAGA---------------TAGtttttttCAT---TACT---- 42324
|| | ||||||||||| ||| ||| ||| || ||||
Sbjct 1101 TTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTC 1160
Query 42325 ------ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTC 42378
|||| | ||||||||| |||| ||||| |||||| || || ||||| |||||
Sbjct 1161 CACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220
Query 42379 AATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAA 42438
|| |||||||| | ||||| || |||| | |||||| || || |||||| || |||
Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280
Query 42439 TCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 42498
||||| | | |||||| ||| ||||| |||||||| || || || || | || |
Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340
Query 42499 TTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATATCTTTAG 42554
|||||||| | || ||| | |||| | ||| ||||| || ||||| |
Sbjct 1341 CGATATAAAATGTCGCTC-TCCTGGCTTAAGTGCATCC---CATTGCACAATGTCTTTGG 1396
Query 42555 ATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGA 42614
| | ||| || ||||| || | ||| ||||| || | |||||||| || | | |||||
Sbjct 1397 ACAAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGA 1456
Query 42615 TATCATGATATTGAATTGGGAAAATAACAAA 42645
|||| ||||||| ||||| || || |||||
Sbjct 1457 TATCCGGATATTGGATTGGCAATATCACAAA 1487
>seq110960
Length=1818
Score = 235 bits (260), Expect = 7e-57
Identities = 615/932 (66%), Gaps = 47/932 (5%)
Strand=Plus/Minus
Query 41754 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCT 41813
|| ||||||||| | |||||||||||| || ||||| || || || || || || |
Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196
Query 41814 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 41873
| || || | || ||||| ||||| |||||||| ||||| | |||| |||| || |
Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136
Query 41874 tAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTT 41933
| || | || | | ||| | ||| || | ||||| | || |||||| |
Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076
Query 41934 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 41992
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017
Query 41993 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 42052
| || || | | |||| || ||| | | || | || | ||||
Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957
Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112
|| |||| | || || || ||| ||| || || || || | |||||| | ||| |||
Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897
Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172
|| || | || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837
Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232
|| |||||||||| |||||| | ||| |||||||| || | ||| || ||| |
Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778
Query 42233 C----TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 42288
| | ||| ||||| | | ||||| | ||||| || | ||||||| | ||
Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGT 719
Query 42289 TTCT-ATGGCATTAAA-GAGA----------------TAGtttttttCAT---TACT--- 42324
| | ||||||||||| ||| ||| ||| || ||||
Sbjct 718 TCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTT 659
Query 42325 -------ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTT 42377
|||| | ||| ||||| |||| ||||| |||||| || |||||||| ||||
Sbjct 658 CCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599
Query 42378 CAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAA 42437
| || |||||||| | ||||| || |||| | |||||| || || |||||| || ||
Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539
Query 42438 ATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 42497
| ||||| | | |||||| ||| ||||| |||||||| || || || || | || |
Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479
Query 42498 GTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----ATATCTTTA 42553
|||||||| | || ||| | |||| | ||| ||||| || |||||
Sbjct 478 ACGATATAAAATGTCGCTC-TCCTGGCTTAAGTGCATCC---CATTGCACAATGTCTTTG 423
Query 42554 GATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAG 42613
|| | ||| || ||||| || | ||| ||||| || | |||||||| || | | ||||
Sbjct 422 GACAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAG 363
Query 42614 ATATCATGATATTGAATTGGGAAAATAACAAA 42645
||||| ||||||| ||||| || || || ||
Sbjct 362 ATATCCGGATATTGGATTGGCAATATCACGAA 331
>seq150668
Length=1318
Score = 201 bits (222), Expect = 2e-46
Identities = 605/926 (65%), Gaps = 51/926 (6%)
Strand=Plus/Minus
Query 41777 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCC 41836
|||||||| || || || || ||||||||||| || || || |||| ||||||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 41837 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 41896
|| |||||||||||||| || |||| || || | || | |||||| | |
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044
Query 41897 CTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 41956
| ||| || | || ||||| || ||| | | |||||||| || || || |
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 41957 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTG---TTATA--A 42011
|| || | ||| |||| ||||||||||| ||||| || || || ||||| |
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCG 42070
| |||| | || | ||||| |||| | |||| | ||| ||||| | | || |||
Sbjct 923 TGGATCCT-CT-TCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCG 870
Query 42071 AAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 42130
|||||||| ||||| |||||||||| ||| || | || ||| || ||||| ||||||
Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810
Query 42131 ATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCT 42190
|| || ||||||||||||||||||||||| | ||||| || || ||||| | |||
Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750
Query 42191 TCTACTGCCGCAAAGGCAATAAGTCTCTCTC-CATAACCG-GCACTGTCATGT---ATCC 42245
||||| || ||||| || | | | | || | || | | | | || | ||||
Sbjct 749 TCTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCC 692
Query 42246 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA---- 42301
| | ||||||| | ||||| ||| | || || || | | || ||||||
Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632
Query 42302 -----------------AAGAGATA---------GtttttttCATTACTATCTTTAACAT 42335
|| ||||| | |||||| | |||| | | |
Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572
Query 42336 ATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATC 42395
| ||||| || | |||| |||||||| ||||| || || ||||| || || || | |
Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512
Query 42396 CGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAA-ATTT 42454
| || ||||| | | || | | ||| |||||| | ||| || || | ||| ||||
Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTT 453
Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514
|| ||||| || ||||| || || ||||| || | || | || ||| |
Sbjct 452 TCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGC 393
Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574
|| |||| | | | |||||||| | | |||||||| | ||| ||||| |||||
Sbjct 392 TCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACT 333
Query 42575 GTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGG 42634
||||| || || || | || || ||||| | ||||| || ||| |||| | ||| ||
Sbjct 332 GTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGA 273
Query 42635 AAAATAACAAATCTATTTGGATTTGG 42660
|| || ||||| | ||||||| ||
Sbjct 272 AACATTACAAAGCGCCTTGGATTGGG 247
>seq93010
Length=2134
Score = 199 bits (220), Expect = 5e-46
Identities = 444/658 (67%), Gaps = 10/658 (2%)
Strand=Plus/Minus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
||||||||||| | |||| ||| | ||| || |||| | | | || || ||||
Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|| ||||| || |||||||| || ||| ||||| || | | | ||| || ||
Sbjct 734 AACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCA 675
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
|| ||||| | || | ||| | | ||| || | |||||| || || | || |||
Sbjct 674 GTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || |||| |||| || |||||||| | ||| | ||| || || ||| ||
Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|| | |||||||| | || |||||||| |||||| || || | |||||| | |||
Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCA 495
Query 72274 CTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331
|| | || || | || ||| || ||| || ||||| || ||||||| || | |
Sbjct 494 GTGCCGCGTATGCAATGAACATT--TACACCAATACCCCCAGCACTTTTAGAAATAAGGG 437
Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391
| ||| | | |||||||| |||||||| || || |||||| |||| | | ||||
Sbjct 436 CACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAA 377
Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
||||||| ||||| ||| | | || || | |||||| | || || |||||||| |
Sbjct 376 AACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAG 317
Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGA 72510
||||||| || |||| | ||||| || ||| ||| ||||| || || |
Sbjct 316 TAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG- 258
Query 72511 TGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTT 72570
|| || || | | ||| | ||| | |||||||||||| | |||| | || ||||
Sbjct 257 TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCG 198
Query 72571 ATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 72625
||||| || ||| || || | ||||| || ||||| ||||| || ||||| |||||
Sbjct 197 ATTTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141
Score = 84.2 bits (92), Expect = 3e-11
Identities = 114/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 71413 AGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGA 71472
||||||||||| || || | || || |||||||| | || || || |||||| ||
Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379
Query 71473 TCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 71532
|| ||| || | ||| ||||| || || | | ||||| || |||||||| |||
Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319
Query 71533 TGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571
||||| || |||||||| |||| ||| | | |||| |||
Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGAA 1280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 668484861242480
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