Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 149 9e-31
seq110960 141 1e-28
seq75644 132 7e-26
>seq150668
Length=1318
Score = 149 bits (164), Expect = 9e-31
Identities = 294/428 (69%), Gaps = 19/428 (4%)
Strand=Plus/Plus
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || || || ||||| || | ||||| || || || ||||| || || ||||||||
Sbjct 733 GCTTTTGCAGCTGTAGAAGGTGTTTTCTTCTCAGGCAGCTTTGCCGCGATATTTTGGCTT 792
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
|| ||||| || || |||||||| || || ||| || ||| ||||| |||||| |||
Sbjct 793 AAAAAGCGTGGTCTTATGCCCGGCCTCACCTTCAGCAATGAGCTTATAAGTCGAGATGAG 852
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTC-GCAACTATCTGCGTCCCGAGTGCAG 125611
|| || || || || || || || || ||| ||| |||| | ||||
Sbjct 853 GGACTGCATTGCGATTTCGCTTGCCTCCTATTTAAGCA--TATC---------ATTGCAA 901
Query 125612 ATCCAGCGATGAAAAGGT--CAT-CAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
| || | ||| ||| ||| | | | || | || || || | || || |||||
Sbjct 902 AACCGGAAGAGAAGAGGATCCATTCTATAATGGAG--GAGGCAGTAAAAATTGAGCAAGA 959
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728
||||| || || | | || ||||| | ||||| ||||| ||| || |||||
Sbjct 960 ATTTCTCACTGATGCTTTGCCCGTCAGTCTCATTGGGATGAATTGCGCTCTTATGTGTCG 1019
Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACG-AGTTGATTGGCCGCAAGATTTACA 125787
||||||||||||||||| |||||||| |||| | | ||| || | ||||||| |
Sbjct 1020 CTACATAGAGTTTGTGGCTGATCGTCTTCTGTCTGAACTTGGTT-ACAAGAAGATTTGGA 1078
Query 125788 ACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTT 125847
|| || | ||||| |||||||| ||| | ||||| || ||||| || ||||| ||||
Sbjct 1079 ACTCCGAAAATCCGTTTGATTTTATGGAAAATATATCTCTGGAGGGCAAAACCAATTTTT 1138
Query 125848 TCGAGAAG 125855
||||||||
Sbjct 1139 TCGAGAAG 1146
>seq110960
Length=1818
Score = 141 bits (156), Expect = 1e-28
Identities = 574/888 (65%), Gaps = 66/888 (7%)
Strand=Plus/Plus
Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069
|||| || || ||| || | |||||||||||| || || || ||| | || ||||||
Sbjct 352 TATCCGGATATCTGGCAATTTTACAAAAAGGCTGTCGCTTCATTCTGGTCAGTTGAAGAG 411
Query 125070 GTCGATCTGTCCAAGGACCT-GTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA 125128
|| ||| ||||||| ||| | || | || |||| | | | | | | | |||||| |
Sbjct 412 GTTGATTTGTCCAAAGACATTGTGCAAT-GGGATGCACTTAAGCCAGGA---GAGCGACA 467
Query 125129 GTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT 125188
||||||||| || || | || ||||| || | | |||||||| || || |||||
Sbjct 468 TTTTATATCGTACGTTCTCGCTTTCTTCGCTGCCAGTGATGGAATTGTGCTGGAAAATCT 527
Query 125189 GTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCC 125247
| || ||| || |||||| ||| | | || ||||| ||||||||||| | |
Sbjct 528 GGTGGAACGGTTTAGTCAAGAAGTTCAAG-TACCCGAGGTCCGATGCTTTTACGGCATGC 586
Query 125248 AAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTC 125307
| || || || || | || ||||| ||||| | | |||||||| | ||| || |
Sbjct 587 AGATGGCAATAGAAAATATTCATTCGGAGATGTATTGTCTTCTGATTGATACGTATATCC 646
Query 125308 GCGATCC---GCAA---------------------------CGTAAACACATGCTCTTTA 125337
| ||||| | || | || | | | | ||||
Sbjct 647 GAGATCCAGTGGAAAAGTATGTATTTTTAAATCTAAGTTTTCTTAGAGATTTCTTGTTTA 706
Query 125338 ACGCAATCGACACGGTGC-CG--TCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGA 125394
| || || |||| | || | | ||| |||||||| || |||| || ||||
Sbjct 707 ATGCCAT---CACGAACCTCGATTGTGTACACAAAAAGGCGCAGTGGGCCCTTGACTGGA 763
Query 125395 TCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCA 125454
| | ||| ||||| ||| ||||| | | | || || || || | || ||
Sbjct 764 TTGGTGATACAAAGTCAACGTTTGCCGAGCGTATTGCAGCCTTTGCTGCAATCGAAGGAG 823
Query 125455 TCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCG 125514
|||||||||| || ||||||||| | || |||||||| |||||||| || || ||||| |
Sbjct 824 TCTTCTTTTCCGGCAGTTTTGCGTCTATATTTTGGCTTAAGAAGCGTGGCCTGATGCCAG 883
Query 125515 GACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCA 125574
| |||| ||| || || |||| ||| ||||| ||||| ||| ||||||||
Sbjct 884 GCTTGACCTTCAGCAATGAACTTATTAGTCGCGACGAAGGCCTTCACACCGACTTTGCTT 943
Query 125575 TTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGA-AAAGGTCATC 125633
|| ||||| ||| || | ||| || | | || |||| | || || |
Sbjct 944 GCCTTCTGTT---CAAACATAT-CGT---GA---AAAAGCC--CGATAAGGAACGTGTTT 991
Query 125634 A--ACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC-TAACCGAATCCCTACCG 125690
| || | | || || || ||||||| ||| |||| | | || || ||||
Sbjct 992 ATGCTATATTCAAGGAGGCATTGGAGATAGAA-AAGGCTTTCTTTAATGAGGCCTTACCC 1050
Query 125691 GTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGAT 125750
|||| |||||||||||||||| | | |||||| ||| | || ||||| || |||
Sbjct 1051 GTCAAACTGATTGGCATGAACTGTGATATGATGTGCCGCTACCTCGAATTTGTTGCCGAT 1110
Query 125751 CGTCTACTGTACGAG-TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTT 125809
|| | ||||||||| ||| || | ||||||| || || ||||||||||||||||
Sbjct 1111 CGCTTGCTGTACGAGCTTGGTT-ACGAGAAGATTTGGAATGCTGAGAATCCCTTTGATTT 1169
Query 125810 CATGACCAGCATATCAC--TAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
||| || ||||| | | ||||| || || ||||| || ||||||
Sbjct 1170 TATG--GAGAATATCTCGATCGAGGGCAAAACGAACTTCTTTGAGAAG 1215
>seq75644
Length=2520
Score = 132 bits (146), Expect = 7e-26
Identities = 568/884 (64%), Gaps = 59/884 (7%)
Strand=Plus/Minus
Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069
|||| || || ||| || | |||||||||||| || || || ||| | || ||||||
Sbjct 1466 TATCCGGATATCTGGCAATTTTACAAAAAGGCTGTTGCTTCATTCTGGTCAGTTGAAGAG 1407
Query 125070 GTCGATCTGTCCAAGGACCT-GTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA 125128
|| ||| ||||||| ||| | || | || |||| | | | | | | | |||||| |
Sbjct 1406 GTTGATTTGTCCAAAGACATTGTGCAAT-GGGATGCACTTAAGCCAGGA---GAGCGACA 1351
Query 125129 GTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT 125188
||||||||| || || | || ||||| || | | |||||||| || || |||||
Sbjct 1350 TTTTATATCGTACGTTCTCGCTTTCTTCGCTGCCAGTGATGGAATTGTGCTGGAAAATCT 1291
Query 125189 GTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCC 125247
| || ||| || |||||| ||| | | || ||||| ||||||||||| | |
Sbjct 1290 GGTGGAACGGTTTAGTCAAGAAGTTCAAG-TACCCGAGGTCCGATGCTTTTACGGCATGC 1232
Query 125248 AAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTC 125307
| || || || || | |||||||| ||||| | | |||||||| | || || |
Sbjct 1231 AGATGGCAATAGAAAATATTCACTCGGAGATGTATTGTCTTCTGATTGATACATATATCC 1172
Query 125308 GCGATCC---GCAA--------------------------CGTAAACACATGCTCTTTAA 125338
| ||||| | || | || | | | | |||||
Sbjct 1171 GAGATCCAGTGGAAAAGTATGTATTTTTAAATCTAAGTTTCTTAGAGATTTCTTGTTTAA 1112
Query 125339 CGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGA 125398
|| ||| | | | | ||| |||||||| || |||| || ||||| |
Sbjct 1111 TGCCATCACAAACCTCGATTGTGTACACAAAAAGGCGCAGTGGGCCCTTGACTGGATTGG 1052
Query 125399 TGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTT 125458
||| ||||| ||| ||||| | | | || || || || | || || ||||
Sbjct 1051 TGATACAAAGTCAACGTTTGCCGAGCGTATTGCAGCCTTTGCTGCAATCGAAGGAGTCTT 992
Query 125459 CTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACT 125518
|||||| || ||||||||| | || |||||||| |||||||| || || ||||| || |
Sbjct 991 CTTTTCCGGCAGTTTTGCGTCTATATTTTGGCTTAAGAAGCGTGGCCTGATGCCAGGCTT 932
Query 125519 GACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCT 125578
||| ||| || || |||| ||| ||||| ||||| ||| |||||||| ||
Sbjct 931 GACCTTCAGCAATGAACTTATTAGTCGCGACGAAGGCCTTCACACCGACTTTGCTTGCCT 872
Query 125579 ACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGA-AAAGGTCATCA--A 125635
||||| ||| || | ||| || | | || |||| | || || | |
Sbjct 871 TCTGTT---CAAACATAT-CGT---GA---AAAAGCC--CGATAAGGAACGTGTTTATGC 824
Query 125636 CATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC-TAACCGAATCCCTACCGGTCA 125694
|| | | || || || ||||||| ||| |||| | | || || |||| || |
Sbjct 823 TATATTCAAGGAGGCATTGGAGATAGAA-AAGGCTTTCTTTAATGAGGCCTTACCCGTAA 765
Query 125695 GCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTC 125754
|||||||||||||||| | | |||||| ||| | || ||||| || |||||
Sbjct 764 AACTGATTGGCATGAACTGTGATATGATGTGCCGTTACCTCGAATTTGTTGCCGATCGCT 705
Query 125755 TACTGTACGAG-TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATG 125813
| || |||||| ||| || | ||||||| || || |||||||||||||||| |||
Sbjct 704 TGCTATACGAGCTTGGTT-ACGAGAAGATTTGGAATGCTGAGAATCCCTTTGATTTTATG 646
Query 125814 ACCAGCATATCAC--TAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
|| ||||| | | ||||| || || ||||| || ||||||
Sbjct 645 --GAGAATATCTCGATCGAGGGCAAAACAAACTTCTTTGAGAAG 604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738128329390480
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