Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 93.3 3e-14
seq32333 93.3 3e-14
>seq171037
Length=1136
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 15132 GTCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAAT 15191
||| ||| || || | ||||| || | || | || || ||||| || || || ||||
Sbjct 1020 GTCAGCCTCCCCTGAGTCTTAGCACCAGGTGCAAAGTAGATTCTTTCTGAATATTATAAT 961
Query 15192 CGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGT 15251
|| || | | |||||||| |||||| || || | || || ||||| |||||
Sbjct 960 CGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAAATTAATCGTTGCTGGTCAG 901
Query 15252 TTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTT 15310
|||||||||||||| || ||||| ||| || | |||| | || || || |
Sbjct 900 GGGGAATTCCTTCTTTATCTTGGATTTTAGCT-TTGATGTTTTCCACTGTGTCACTTGAT 842
Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || ||||| || || || ||||||||||| |||||||| |||||
Sbjct 841 TCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAACAAAAATCTGCAT 789
>seq32333
Length=4216
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 15132 GTCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAAT 15191
||| ||| || || | ||||| || | || | || || ||||| || || || ||||
Sbjct 3756 GTCAGCCTCCCCTGAGTCTTAGCACCAGGTGCAAAGTAGATTCTTTCTGAATATTATAAT 3815
Query 15192 CGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGT 15251
|| || | | |||||||| |||||| || || | || || ||||| |||||
Sbjct 3816 CGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAAATTAATCGTTGCTGGTCAG 3875
Query 15252 TTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTT 15310
|||||||||||||| || ||||| ||| || | |||| | || || || |
Sbjct 3876 GGGGAATTCCTTCTTTATCTTGGATTTTAGCT-TTGATGTTTTCCACTGTGTCACTTGAT 3934
Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || ||||| || || || ||||||||||| |||||||| |||||
Sbjct 3935 TCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAACAAAAATCTGCAT 3987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360782600560518
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |