Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 82.4 6e-11
>seq171037
Length=1136
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
|| ||||| || |||||||||||||| | | || || | || || || ||||| ||
Sbjct 757 GTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCGAGTTGTTTTCCA 698
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
||| ||||||| || || ||||| || | || || ||||| ||| ||| |||
Sbjct 697 GCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTCGACTTT 638
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024
|| | | | || || | | ||| ||| | ||||| || || || || | |||
Sbjct 637 ACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGTAATTGTCTTTCCAGTCAGTGTT 578
Query 19025 TTGACAAAAATTTGCATTTTAAATCTCTTATAAAT 19059
|||||||| |||||||||||| || ||| ||||
Sbjct 577 TTGACAAATATTTGCATTTTAGATTGCTTTAAAAT 543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412974165566812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |