Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq237869 89.7 6e-13 seq218312 84.2 3e-11 >seq237869 Length=756 Score = 89.7 bits (98), Expect = 6e-13 Identities = 86/108 (80%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 129467 TCAATCAAGACATTT-TGATCTATTTCATAAGCAGTTTTAAACACAAGTTTTTCACGATC 129525 ||||| ||| || || ||||| ||||||||||| ||||| || ||| ||||||| ||| Sbjct 248 TCAAT-AAGCCAGTTCTGATCAATTTCATAAGCTGTTTTGAAAACATCTTTTTCATGATT 190 Query 129526 TGTTAAAAAAGGTAAATGTTGAACAGAACCATCTTTATTTACAATGGA 129573 | ||||||| ||||||||||||| || || || ||| | ||||||| Sbjct 189 AGATAAAAAATGTAAATGTTGAACTGATCCCTCATTAGTGGCAATGGA 142 >seq218312 Length=839 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 19390 TGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGA 19449 || ||| ||||| || || ||||| |||||||||||||||||||| |||||| || Sbjct 439 TGGTCAGAAAGGAACTTGCGGTATCCGATATCGTCAAGAAGATATGCCCTTTACTTGCGA 498 Query 19450 TGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 || ||| |||||| |||| || || || || ||| |||| || |||||||| Sbjct 499 AGGGATAACCCCGGATATTATAATCAATCCTCACGCTATTCCCAGCCGAATGAC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593515341136800