Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq237869 89.7 6e-13
seq218312 84.2 3e-11
>seq237869
Length=756
Score = 89.7 bits (98), Expect = 6e-13
Identities = 86/108 (80%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 129467 TCAATCAAGACATTT-TGATCTATTTCATAAGCAGTTTTAAACACAAGTTTTTCACGATC 129525
||||| ||| || || ||||| ||||||||||| ||||| || ||| ||||||| |||
Sbjct 248 TCAAT-AAGCCAGTTCTGATCAATTTCATAAGCTGTTTTGAAAACATCTTTTTCATGATT 190
Query 129526 TGTTAAAAAAGGTAAATGTTGAACAGAACCATCTTTATTTACAATGGA 129573
| ||||||| ||||||||||||| || || || ||| | |||||||
Sbjct 189 AGATAAAAAATGTAAATGTTGAACTGATCCCTCATTAGTGGCAATGGA 142
>seq218312
Length=839
Score = 84.2 bits (92), Expect = 3e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 19390 TGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGA 19449
|| ||| ||||| || || ||||| |||||||||||||||||||| |||||| ||
Sbjct 439 TGGTCAGAAAGGAACTTGCGGTATCCGATATCGTCAAGAAGATATGCCCTTTACTTGCGA 498
Query 19450 TGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
|| ||| |||||| |||| || || || || ||| |||| || ||||||||
Sbjct 499 AGGGATAACCCCGGATATTATAATCAATCCTCACGCTATTCCCAGCCGAATGAC 552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593515341136800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |