Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq161538 91.5 8e-14
seq211321 82.4 4e-11
seq40145 82.4 4e-11
>seq161538
Length=1216
Score = 91.5 bits (100), Expect = 8e-14
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
|||| || ||||| | || |||||||||| |||||||||||||||||||||||||||
Sbjct 672 AAAAAGAACTTGGCTCCAGAGGGGATCGAACCCTCGACCTTCGCGTTATTAGCACGACGC 613
Query 11506 TCTRACCAACTGAGCTA 11522
||| |||| ||||||||
Sbjct 612 TCTAACCAGCTGAGCTA 596
>seq211321
Length=874
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 234 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 175
Query 11528 CC 11529
||
Sbjct 174 CC 173
>seq40145
Length=3774
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 62 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 3
Query 11528 CC 11529
||
Sbjct 2 CC 1
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 3766 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 3707
Query 11528 CC 11529
||
Sbjct 3706 CC 3705
Lambda K H
0.639 0.410 0.922
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260482863620248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |