Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq75644 264 1e-65 seq110960 257 2e-63 seq150668 224 1e-53 seq93010 179 5e-40 >seq75644 Length=2520 Score = 264 bits (292), Expect = 1e-65 Identities = 619/927 (67%), Gaps = 38/927 (4%) Strand=Plus/Plus Query 32993 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33052 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 33053 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 33112 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 33113 tAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTT 33172 | || | || | | ||| | ||| || || ||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 33173 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAA-GAAATTCTTGTTCAATG 33231 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 33232 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 33291 | || || | | |||| ||| ||| | | || | || | |||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862 Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || |||| | || || || ||| ||| || || ||||| | |||||| ||||| ||| Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || | || ||||| ||||||||||| |||||||||||||| || || || Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 33469 || |||||||||| |||||| | |||||||||||| || | ||| || ||| | Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041 Query 33470 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | ||| || ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG-GT 1100 Query 33528 TTCT-ATGGCATTAAAGA------------GATAGtt---ttt---------ttCATT-- 33560 || | ||||||||||| | || | || ||| | | || Sbjct 1101 TTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTC 1160 Query 33561 -ACT--ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTC 33617 ||| |||| | ||| ||||| |||| ||||| |||||| ||||| ||||| ||||| Sbjct 1161 CACTGGATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220 Query 33618 AATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAA 33677 || |||||||| | ||||| || |||| |||||| | || |||||| || ||| Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280 Query 33678 TCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33737 |||||| ||| |||||| ||| ||||| |||||||| || || || || | || | Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340 Query 33738 TTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATAT 33797 |||||||| | || |||| | ||| || ||| | || ||||| || | Sbjct 1341 CGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAA 1400 Query 33798 ATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTC 33857 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| || Sbjct 1401 ATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATC 1460 Query 33858 ATAATATTGGATTGGGAAAATAACAAA 33884 |||||||||||| || || ||||| Sbjct 1461 CGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 257 bits (284), Expect = 2e-63 Identities = 617/928 (66%), Gaps = 39/928 (4%) Strand=Plus/Minus Query 32993 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 33052 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 33053 TTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttt 33112 | || || | || ||||| ||||| |||||||| ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 33113 tAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTT 33172 | || | || | | ||| | ||| || || ||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 33173 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAA-GAAATTCTTGTTCAATG 33231 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 33232 GATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGT 33291 | || || | | |||| ||| ||| | | || | || | |||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957 Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 || |||| | || || || ||| ||| || || ||||| | |||||| ||||| ||| Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || | || ||||| ||||||||||| |||||||||||||| || || || Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 33469 || |||||||||| |||||| | |||||||||||| || | ||| || ||| | Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778 Query 33470 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | ||| || ||||| | | ||||| | ||||| || | ||||||| | || Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG-GT 719 Query 33528 TTCT-ATGGCATTAAAGA------------GA-----TAGtttttttCAT---TACT--- 33563 | | ||||||||||| | || ||| ||| || |||| Sbjct 718 TCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTT 659 Query 33564 -------ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 33616 |||| | ||| ||||| |||| ||||| |||||| ||||||||||| |||| Sbjct 658 CCACTGGATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599 Query 33617 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAA 33676 | || |||||||| | ||||| || |||| |||||| | || |||||| || || Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539 Query 33677 ATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33736 | |||||| ||| |||||| ||| ||||| |||||||| || || || || | || | Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479 Query 33737 GTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33796 |||||||| | || |||| | ||| || ||| | || ||||| || | Sbjct 478 ACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACA 419 Query 33797 TATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGT 33856 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| | Sbjct 418 AATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATAT 359 Query 33857 CATAATATTGGATTGGGAAAATAACAAA 33884 | |||||||||||| || || || || Sbjct 358 CCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 224 bits (248), Expect = 1e-53 Identities = 606/925 (66%), Gaps = 49/925 (5%) Strand=Plus/Minus Query 33016 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33075 |||||||| || || || || ||||||||||| ||||| || |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 33076 ATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 33135 || |||||||||||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 33136 CTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 33195 | ||| || || || ||||| || ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 33196 ACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGAT 33255 || || | ||| |||| ||||||||||| ||||| ||| || || || ||||| Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGA- 925 Query 33256 CTAACGGTT--TCTTCACT--CGGTGGATGCAATAA-ATGTTTAAACATCAAACATGCGA 33310 | || | ||||| || |||| |||||| | ||| ||||| | | || |||| Sbjct 924 ---ATGGATCCTCTTCTCTTCCGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCGA 869 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 ||||||| ||||| ||||| |||| ||| || || || ||| || ||||| ||||||| Sbjct 868 AATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCA 809 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTT 33430 | || ||||||||||||||||||||||| | || || || || ||||| | |||| Sbjct 808 TAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTT 749 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT---ATCC 33484 |||| || ||||| || | | | | || | || | ||| || | |||| Sbjct 748 CTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATCC 692 Query 33485 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA---- 33540 | | ||||||| | ||||| ||| | || || || | | || |||||| Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632 Query 33541 -----------------AAGAGATA---------GtttttttCATTACTATCTTTAACAT 33574 || ||||| | |||||| | |||| | | | Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572 Query 33575 AAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATC 33634 ||||||| || | |||| |||||||| ||||| || || ||||| || || || | | Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512 Query 33635 CGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTT 33694 | || ||||| | | | || | ||||| |||||| | ||| || || | ||||| Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTT 452 Query 33695 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 33754 | ||||| || ||||| || || ||||| || | || | || ||| | | Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392 Query 33755 CGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTG 33814 | | || | ||| |||||||| | | |||||||| | ||| ||||| || |||| Sbjct 391 CTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTG 332 Query 33815 TCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGA 33874 |||| || || ||| | || || ||||| | ||||| |||||| ||| | || || | Sbjct 331 TCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAA 272 Query 33875 AAATAACAAATCTATTTGGATTTGG 33899 | || ||||| | ||||||| || Sbjct 271 ACATTACAAAGCGCCTTGGATTGGG 247 >seq93010 Length=2134 Score = 179 bits (198), Expect = 5e-40 Identities = 437/656 (67%), Gaps = 6/656 (1%) Strand=Plus/Minus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||||||||| | |||| ||| | ||| || || | | ||| || || |||| Sbjct 794 CCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGCATA 735 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || ||||| || |||||||| || ||| ||||| || | | | || || || Sbjct 734 AACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCA 675 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 || ||||| | || | ||| | | ||| || | |||||| || || | || ||| Sbjct 674 GTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATG 615 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | ||||||| |||| || |||||||| | ||| | ||| || || ||| || Sbjct 614 GCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAA 555 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | |||||||| | || || || || |||||| ||||| | |||||| | ||| Sbjct 554 ACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCA 495 Query 63468 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63527 || | || || | || || ||| || ||||| || ||||||| || | || Sbjct 494 GTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCA 435 Query 63528 CATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63587 ||| | | || ||||| || ||||| ||||| ||||| |||| | | |||||| Sbjct 434 CATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAA 375 Query 63588 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647 ||||| ||||| ||| | | || || | |||||| | || || |||||||| ||| Sbjct 374 CAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTA 315 Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63706 ||||| || || | | ||||| || ||| ||| ||||| || || | || Sbjct 314 AACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG-TG 256 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 ||| || | || ||| | ||| | ||| |||||||| | |||| | || || | || Sbjct 255 AATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATCGAT 196 Query 63767 TTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63819 ||| || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 195 TTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 62607 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 62666 ||||||||||| || || | ||| | |||||||| | || ||||| ||||||||| Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 62667 TCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCT 62726 || ||| || ||| ||||| || || | | ||||| || || ||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 62727 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764 |||||||| |||||||| |||| || | | |||| || Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620483459397680