Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq75644 255 7e-63 seq110960 248 1e-60 seq150668 232 8e-56 seq93010 197 2e-45 >seq75644 Length=2520 Score = 255 bits (282), Expect = 7e-63 Identities = 614/927 (66%), Gaps = 38/927 (4%) Strand=Plus/Plus Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469 | || || | || ||||| ||||| ||||| || ||||| | |||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 32588 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 32648 | || || | | |||| || ||| | | || | || | |||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862 Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708 || |||| | || || || ||| ||| || || ||||| | |||||| | ||| ||| Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922 Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768 || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 32826 || |||||||| | |||||| | ||| |||||||| || | ||| || ||| | Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041 Query 32827 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA-------- 32876 | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTT 1101 Query 32877 ------GGCATTG---------TCTCTA-------TAGCATTAAAGAGATAGtttttttC 32914 |||||| |||||| ||| ||||| | | | |||| | Sbjct 1102 TGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCC 1161 Query 32915 ATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTC 32974 | | |||| | |||||||||||||| ||||| |||||| ||||| ||||| ||||| Sbjct 1162 ACTGG-ATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220 Query 32975 AATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAA 33034 || ||||| || | ||||| ||||||| |||||| | || |||||| || ||| Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280 Query 33035 TCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33094 ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340 Query 33095 TTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATAT 33154 |||||||| | || |||| | ||| || ||| | || ||||| || | Sbjct 1341 CGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAA 1400 Query 33155 ATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 33214 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| || Sbjct 1401 ATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATC 1460 Query 33215 ATGATATTGAATTGGAAAAATAACAAA 33241 ||||||| ||||| || || ||||| Sbjct 1461 CGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 248 bits (274), Expect = 1e-60 Identities = 613/928 (66%), Gaps = 39/928 (4%) Strand=Plus/Minus Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409 || ||||||||| | |||||||||||| || ||||| || || || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469 | || || | || ||||| ||||| ||||| || ||||| | |||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529 | || | || | | ||| | ||| || |||||||| | || |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 32588 |||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 32648 | || || | | |||| || ||| | | || | || | |||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957 Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708 || |||| | || || || ||| ||| || || ||||| | |||||| | ||| ||| Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897 Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768 || || | || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837 Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 32826 || |||||||| | |||||| | ||| |||||||| || | ||| || ||| | Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778 Query 32827 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA-------- 32876 | ||| || ||||| | | ||||| | ||||| || | ||||||| Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTT 718 Query 32877 ------GGCATTG---------TCTCTA--------TAGCATTAAAGAGATAGttttttt 32913 |||||| |||||| ||| ||||| | | | |||| Sbjct 717 CGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTC 658 Query 32914 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 32973 || | |||| | ||| |||||||||| ||||| |||||| ||||||||||| |||| Sbjct 657 CACTGG-ATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599 Query 32974 CAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAA 33033 | || ||||| || | ||||| ||||||| |||||| | || |||||| || || Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539 Query 33034 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33093 | ||||| | | |||||| ||| ||||| |||||||| || || || || | || | Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479 Query 33094 GTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33153 |||||||| | || |||| | ||| || ||| | || ||||| || | Sbjct 478 ACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACA 419 Query 33154 TATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGT 33213 ||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| | Sbjct 418 AATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATAT 359 Query 33214 CATGATATTGAATTGGAAAAATAACAAA 33241 | ||||||| ||||| || || || || Sbjct 358 CCGGATATTGGATTGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 232 bits (256), Expect = 8e-56 Identities = 612/924 (66%), Gaps = 53/924 (6%) Strand=Plus/Minus Query 32373 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCC 32432 |||||||| || || || || ||||||||||| ||||| || || | |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 32433 ATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 32492 || ||||| || ||||| || |||| || || | || | |||||| | | Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 32493 CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 32552 | ||| || ||||| ||||| || ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 32553 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTG---TTATA--A 32607 || || | ||| |||| ||||||||||| ||||| || || || ||||| | Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCG 32666 | |||| | || | ||||| |||| | |||| | ||| ||||| | | || ||| Sbjct 923 TGGATCCT-CT-TCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCG 870 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 |||||||| || || ||||| |||| ||| || | || ||| || ||||| |||||| Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || || ||||||||||||||||||||||| | ||||| || || ||||||| ||| Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT---ATC 32840 ||||| || ||||| || | | | | || | || | ||| || | ||| Sbjct 749 TCTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATC 693 Query 32841 CACTTTTGAGCCCAATCGGCCTTCTTTTTTAC-----ACAAG---------GCATT---- 32882 || | ||||||| | ||||| ||| | || |||| ||||| Sbjct 692 CAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGC 633 Query 32883 -----GTCTCTATAGCATTAAAGAGATA-------GtttttttCATTACTATCTTTAACA 32930 ||| ||| | | ||||| ||| | |||||| | |||| | | Sbjct 632 AAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATG 573 Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 || |||||||| | |||| |||||||| ||||| || || ||||| || ||||| | Sbjct 572 TAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATG 513 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA-ATT 33049 || || || || | | | || | ||||| |||||| | ||| || || | ||| ||| Sbjct 512 CCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATT 454 Query 33050 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 33109 ||| ||||| || ||||| || || ||||| || | || | || ||| | Sbjct 453 TTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCG 394 Query 33110 TTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCAC 33169 || | || | ||| |||||||| | | |||||||| | ||| ||||| || || Sbjct 393 CTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTAC 334 Query 33170 TGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGG 33229 |||||| || || ||| | || || ||||| | ||||| |||||| |||| | ||| || Sbjct 333 TGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGG 274 Query 33230 AAAAATAACAAATCTATTTGGATT 33253 ||| || ||||| | ||||||| Sbjct 273 AAACATTACAAAGCGCCTTGGATT 250 >seq93010 Length=2134 Score = 197 bits (218), Expect = 2e-45 Identities = 443/659 (67%), Gaps = 6/659 (1%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||||||||| | |||| ||| | ||| || || | | ||| || || | Sbjct 797 AGGCCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGC 738 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 ||||| ||||| || |||||||| || ||| ||||| || | | | || || Sbjct 737 ATAAACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCA 678 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || || ||||| | || | ||| | | ||| || | |||||| || || | || Sbjct 677 CCAGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAG 618 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | ||||||| |||| || |||||||| | ||| | ||| || || ||| Sbjct 617 ATGGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTA 558 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 |||| | |||||||| | || |||||||| |||||| || || | |||||| | Sbjct 557 AAAACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTA 498 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 ||| || | || || | || || ||| || ||||| || ||||||| || | Sbjct 497 CCAGTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGG 438 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439 || ||| | | |||||||| |||||||| || || |||||| |||| | | ||| Sbjct 437 GCACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGA 378 Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499 |||||||| ||||| ||| | | || || | |||||| | || || ||||||||| Sbjct 377 AAACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGA 318 Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTG 63558 |||||||| || || | | ||||| || ||| ||| ||||| || || | Sbjct 317 GTAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG 258 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 ||||| || | || ||| | ||| | ||| |||||||| | |||| | || || | Sbjct 257 -TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATC 199 Query 63619 TATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63674 ||||| || ||| || || | ||||| || ||||| ||||| || ||||| ||||| Sbjct 198 GATTTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141 Score = 82.4 bits (90), Expect = 1e-10 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 62462 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 62521 ||||||||||| || || | ||| | |||||||| | || ||||| ||||||||| Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379 Query 62522 TCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 62581 || || || ||| ||||| || || | | ||||| || |||||||| ||| Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319 Query 62582 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 |||||||| |||||||| |||| || | | |||| || Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631126001280800