Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 255 7e-63
seq110960 248 1e-60
seq150668 232 8e-56
seq93010 197 2e-45
>seq75644
Length=2520
Score = 255 bits (282), Expect = 7e-63
Identities = 614/927 (66%), Gaps = 38/927 (4%)
Strand=Plus/Plus
Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409
|| ||||||||| | |||||||||||| || ||||| || || || || || ||||
Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623
Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469
| || || | || ||||| ||||| ||||| || ||||| | |||| |||| || |
Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683
Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529
| || | || | | ||| | ||| || |||||||| | || |||||| |
Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743
Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 32588
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802
Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 32648
| || || | | |||| || ||| | | || | || | ||||
Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862
Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708
|| |||| | || || || ||| ||| || || ||||| | |||||| | ||| |||
Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922
Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768
|| || | || ||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982
Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 32826
|| |||||||| | |||||| | ||| |||||||| || | ||| || ||| |
Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 1041
Query 32827 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA-------- 32876
| ||| || ||||| | | ||||| | ||||| || | |||||||
Sbjct 1042 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTT 1101
Query 32877 ------GGCATTG---------TCTCTA-------TAGCATTAAAGAGATAGtttttttC 32914
|||||| |||||| ||| ||||| | | | |||| |
Sbjct 1102 TGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCC 1161
Query 32915 ATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTC 32974
| | |||| | |||||||||||||| ||||| |||||| ||||| ||||| |||||
Sbjct 1162 ACTGG-ATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTC 1220
Query 32975 AATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAA 33034
|| ||||| || | ||||| ||||||| |||||| | || |||||| || |||
Sbjct 1221 TATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAA 1280
Query 33035 TCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 33094
||||| | | |||||| ||| ||||| |||||||| || || || || | || |
Sbjct 1281 CCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTA 1340
Query 33095 TTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATAT 33154
|||||||| | || |||| | ||| || ||| | || ||||| || |
Sbjct 1341 CGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAA 1400
Query 33155 ATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 33214
||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| ||
Sbjct 1401 ATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATC 1460
Query 33215 ATGATATTGAATTGGAAAAATAACAAA 33241
||||||| ||||| || || |||||
Sbjct 1461 CGGATATTGGATTGGCAATATCACAAA 1487
>seq110960
Length=1818
Score = 248 bits (274), Expect = 1e-60
Identities = 613/928 (66%), Gaps = 39/928 (4%)
Strand=Plus/Minus
Query 32350 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 32409
|| ||||||||| | |||||||||||| || ||||| || || || || || ||||
Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196
Query 32410 TACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttt 32469
| || || | || ||||| ||||| ||||| || ||||| | |||| |||| || |
Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136
Query 32470 tAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTT 32529
| || | || | | ||| | ||| || |||||||| | || |||||| |
Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076
Query 32530 CACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAA-GAAATTCTTGTTCAATA 32588
|||| ||||| || || ||||| || || | ||| || ||| |||| ||| ||| ||
Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017
Query 32589 GAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGT 32648
| || || | | |||| || ||| | | || | || | ||||
Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957
Query 32649 TTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTG 32708
|| |||| | || || || ||| ||| || || ||||| | |||||| | ||| |||
Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897
Query 32709 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT 32768
|| || | || ||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837
Query 32769 CCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC--GG 32826
|| |||||||| | |||||| | ||| |||||||| || | ||| || ||| |
Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCA-AACGTTGA 778
Query 32827 CGCTGT--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA-------- 32876
| ||| || ||||| | | ||||| | ||||| || | |||||||
Sbjct 777 CTTTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTT 718
Query 32877 ------GGCATTG---------TCTCTA--------TAGCATTAAAGAGATAGttttttt 32913
|||||| |||||| ||| ||||| | | | ||||
Sbjct 717 CGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTC 658
Query 32914 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 32973
|| | |||| | ||| |||||||||| ||||| |||||| ||||||||||| ||||
Sbjct 657 CACTGG-ATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTT 599
Query 32974 CAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAA 33033
| || ||||| || | ||||| ||||||| |||||| | || |||||| || ||
Sbjct 598 CTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAA 539
Query 33034 ATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33093
| ||||| | | |||||| ||| ||||| |||||||| || || || || | || |
Sbjct 538 ACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGT 479
Query 33094 GTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33153
|||||||| | || |||| | ||| || ||| | || ||||| || |
Sbjct 478 ACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACA 419
Query 33154 TATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGT 33213
||| || ||||| |||| ||| ||||| || | |||||||| || | | |||||| |
Sbjct 418 AATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATAT 359
Query 33214 CATGATATTGAATTGGAAAAATAACAAA 33241
| ||||||| ||||| || || || ||
Sbjct 358 CCGGATATTGGATTGGCAATATCACGAA 331
>seq150668
Length=1318
Score = 232 bits (256), Expect = 8e-56
Identities = 612/924 (66%), Gaps = 53/924 (6%)
Strand=Plus/Minus
Query 32373 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCC 32432
|||||||| || || || || ||||||||||| ||||| || || | ||||||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 32433 ATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAAT 32492
|| ||||| || ||||| || |||| || || | || | |||||| | |
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044
Query 32493 CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 32552
| ||| || ||||| ||||| || ||| | | |||||||| || || || |
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 32553 ACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTG---TTATA--A 32607
|| || | ||| |||| ||||||||||| ||||| || || || ||||| |
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCG 32666
| |||| | || | ||||| |||| | |||| | ||| ||||| | | || |||
Sbjct 923 TGGATCCT-CT-TCTCTTC---CGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAGCG 870
Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726
|||||||| || || ||||| |||| ||| || | || ||| || ||||| ||||||
Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810
Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786
|| || ||||||||||||||||||||||| | ||||| || || ||||||| |||
Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750
Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGT---ATC 32840
||||| || ||||| || | | | | || | || | ||| || | |||
Sbjct 749 TCTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGT-ATCTCCAATC 693
Query 32841 CACTTTTGAGCCCAATCGGCCTTCTTTTTTAC-----ACAAG---------GCATT---- 32882
|| | ||||||| | ||||| ||| | || |||| |||||
Sbjct 692 CAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGC 633
Query 32883 -----GTCTCTATAGCATTAAAGAGATA-------GtttttttCATTACTATCTTTAACA 32930
||| ||| | | ||||| ||| | |||||| | |||| | |
Sbjct 632 AAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATG 573
Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990
|| |||||||| | |||| |||||||| ||||| || || ||||| || ||||| |
Sbjct 572 TAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATG 513
Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAA-ATT 33049
|| || || || | | | || | ||||| |||||| | ||| || || | ||| |||
Sbjct 512 CCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATT 454
Query 33050 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTT 33109
||| ||||| || ||||| || || ||||| || | || | || ||| |
Sbjct 453 TTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCG 394
Query 33110 TTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCAC 33169
|| | || | ||| |||||||| | | |||||||| | ||| ||||| || ||
Sbjct 393 CTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTAC 334
Query 33170 TGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGG 33229
|||||| || || ||| | || || ||||| | ||||| |||||| |||| | ||| ||
Sbjct 333 TGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGG 274
Query 33230 AAAAATAACAAATCTATTTGGATT 33253
||| || ||||| | |||||||
Sbjct 273 AAACATTACAAAGCGCCTTGGATT 250
>seq93010
Length=2134
Score = 197 bits (218), Expect = 2e-45
Identities = 443/659 (67%), Gaps = 6/659 (1%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| ||||||||||| | |||| ||| | ||| || || | | ||| || || |
Sbjct 797 AGGCCAGGACATTCGTGCGGATCCATAAGACTCCAGTCGCCATTAGCCTCAACACGGCGC 738
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
||||| ||||| || |||||||| || ||| ||||| || | | | || ||
Sbjct 737 ATAAACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCA 678
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| || ||||| | || | ||| | | ||| || | |||||| || || | ||
Sbjct 677 CCAGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAG 618
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | ||||||| |||| || |||||||| | ||| | ||| || || |||
Sbjct 617 ATGGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTA 558
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
|||| | |||||||| | || |||||||| |||||| || || | |||||| |
Sbjct 557 AAAACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTA 498
Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379
||| || | || || | || || ||| || ||||| || ||||||| || |
Sbjct 497 CCAGTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGG 438
Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 63439
|| ||| | | |||||||| |||||||| || || |||||| |||| | | |||
Sbjct 437 GCACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGA 378
Query 63440 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGA 63499
|||||||| ||||| ||| | | || || | |||||| | || || |||||||||
Sbjct 377 AAACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGA 318
Query 63500 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTG 63558
|||||||| || || | | ||||| || ||| ||| ||||| || || |
Sbjct 317 GTAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCATCAAAG 258
Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618
||||| || | || ||| | ||| | ||| |||||||| | |||| | || || |
Sbjct 257 -TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATTATC 199
Query 63619 TATTTTCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63674
||||| || ||| || || | ||||| || ||||| ||||| || ||||| |||||
Sbjct 198 GATTTT-AAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTGAAA 141
Score = 82.4 bits (90), Expect = 1e-10
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 62462 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 62521
||||||||||| || || | ||| | |||||||| | || ||||| |||||||||
Sbjct 1438 AGTTCACAACTGGCTTCAAGGGCAGCAAAATAAATGTTCTCAAAGATGAGCTTATTTAGT 1379
Query 62522 TCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 62581
|| || || ||| ||||| || || | | ||||| || |||||||| |||
Sbjct 1378 TCCCTTGCCTCGGAGCTTTCAAAAGGGAAACGCATACGCATAAAGGCATCTGCTAAGCCT 1319
Query 62582 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619
|||||||| |||||||| |||| || | | |||| ||
Sbjct 1318 TGAACACCTATACCGATTGGTCGGTGACGCATATTCGA 1281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631126001280800
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