Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 208 8e-49
seq110960 196 5e-45
seq150668 149 7e-31
>seq75644
Length=2520
Score = 208 bits (230), Expect = 8e-49
Identities = 599/922 (65%), Gaps = 41/922 (4%)
Strand=Plus/Plus
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
|||||||||||||||||| || |||||||| ||||| || || || | || ||
Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGAT--- 639
Query 92862 ATTCACTAGTGATT-----GGATTCTTGGCGTTATAATACTTTTCACCGATCAA-CTCGT 92915
|||| | | | | ||||||| || || || ||| || | ||| |||||
Sbjct 640 ATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTA-ACCAAGCTCGT 698
Query 92916 ACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTA 92975
| | || | ||| || |||||||| | ||| | |||||| |||||| ||||| || |
Sbjct 699 ATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAA 758
Query 92976 GAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035
|| ||| |||| || || | |||||| | || || || | | || || || |
Sbjct 759 TCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGA 818
Query 93036 AGATTTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC 93094
| || | || | | | | | | | ||||| |||| || ||| ||| | |||
Sbjct 819 ATATAGCATAAACACGTTCCTTATCGGGCTTTTTC-ACGATATGTTTGAACAGAAGGCAA 877
Query 93095 GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCT 93154
||||||||||| || | |||||||| || || | ||||||||||| || || |||
Sbjct 878 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 937
Query 93155 GGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATA 93214
|| | ||| || || ||||| ||||||||||| || |||||||| || ||||| || |
Sbjct 938 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 997
Query 93215 CCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATC 93274
||||| | || ||||| || ||||||| |||||||| ||| || | |||
Sbjct 998 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 1057
Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334
|| | | ||||| | || ||||| | | |||| || || ||| || |||||
Sbjct 1058 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTGATGGCATTAAAC 1117
Query 93335 AGGTAATCTC--------------------------GCTCGTCC---GAATCTCGTATGT 93365
| | |||||| || ||| | |||||| || |
Sbjct 1118 AAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177
Query 93366 ATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATC 93425
||||||| || | ||| ||||||| || || || | ||| || ||||| || || | |
Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237
Query 93426 CGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTT 93485
|||| || |||| | || | | || ||||||||| ||| | || || |||||||
Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297
Query 93486 CATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCT 93545
| || || ||||| || || || ||||| | | | | |||||||||| ||
Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357
Query 93546 CATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAG 93605
| | ||||| |||||| | | ||||| || | ||| || ||||| || |
Sbjct 1358 CTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACTG 1417
Query 93606 TCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAA 93665
||| || || || | || |||||||| | | ||| || || ||||||| ||||| |
Sbjct 1418 ACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGCA 1477
Query 93666 ATATGACAAAACGATTAGGGTT 93687
|||| ||||| ||| ||||||
Sbjct 1478 ATATCACAAACCGACGAGGGTT 1499
>seq110960
Length=1818
Score = 196 bits (216), Expect = 5e-45
Identities = 599/925 (65%), Gaps = 46/925 (5%)
Strand=Plus/Minus
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
|||||||||||||||||| || |||||||| || || || || || | || ||
Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGAT--- 1180
Query 92862 ATTCACTAGTGATT-----GGATTCTTGGCGTTATAATACTTTTCACCGATCAA-CTCGT 92915
|||| | | | | ||||||| || || || ||| || | ||| |||||
Sbjct 1179 ATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTA-ACCAAGCTCGT 1121
Query 92916 ACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTA 92975
||| || | ||| || |||||||| | ||| | |||||| |||||| ||||| || |
Sbjct 1120 ACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAA 1061
Query 92976 GAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035
|| || |||| || || | |||||| | || || || | | || || || |
Sbjct 1060 TCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGA 1001
Query 93036 AGATTTCTATTACTC-TACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC 93094
| || | || | | | | | | | ||||| |||| || ||| ||| | |||
Sbjct 1000 ATATAGCATAAACACGTTCCTTATCGGGCTTTTTC-ACGATATGTTTGAACAGAAGGCAA 942
Query 93095 GCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCT 93154
||||||||||| || | |||||||| || || | ||||||||||| || || |||
Sbjct 941 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 882
Query 93155 GGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATA 93214
|| | ||| || || ||||| ||||||||||| || |||||||| || ||||| || |
Sbjct 881 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 822
Query 93215 CCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATC 93274
||||| | || ||||| || ||||||| |||||||| ||| || | |||
Sbjct 821 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 762
Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC--GATAGCGTTAA 93332
|| | | ||||| | || ||||| | | |||| | | | ||| ||| || ||||
Sbjct 761 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA--TCGAGGTTCGTGATGGCATTAA 704
Query 93333 ATAGGTAATCTC---------------------------GCTCGTCC---GAATCTCGTA 93362
| | | |||||| || ||| | |||||| |
Sbjct 703 ACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGA 644
Query 93363 TGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGA 93422
| || ||||| || | ||| ||||||| || ||||| | ||| || ||||| || || |
Sbjct 643 TATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCA 584
Query 93423 ATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGAT 93482
||||| || |||| | || | | || ||||||||| ||| | || || ||||
Sbjct 583 TGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGAT 524
Query 93483 TTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTT 93542
|||| || || ||||| || || || ||||| | | | | ||||||||||
Sbjct 523 TTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTC 464
Query 93543 TCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGA 93602
||| | ||||| |||||| | | ||||| || | ||| || ||||| |
Sbjct 463 GCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAA 404
Query 93603 CAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTG 93662
| | ||| || || || | || |||||||| | | ||| || || ||||||| ||||
Sbjct 403 CTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTG 344
Query 93663 GAAATATGACAAAACGATTAGGGTT 93687
| ||||| || || ||| ||||||
Sbjct 343 GCAATATCACGAACCGACGAGGGTT 319
>seq150668
Length=1318
Score = 149 bits (164), Expect = 7e-31
Identities = 513/790 (65%), Gaps = 44/790 (6%)
Strand=Plus/Minus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985
|||||| ||||| |||||||| || |||| | | | |||||||| || | |||| ||
Sbjct 1041 ATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTGAC 982
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
|| | ||| || || | || |||| ||| ||| || || || | || || ||
Sbjct 981 GGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGA-AT 923
Query 93046 ---TACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102
| |||| || || | ||||| | || || || | | | ||| || || ||
Sbjct 922 GGATCCTCTTCTCTTCCG--GTTTTGCAATGATATGCTTAAATAGGAGGCAAGCGAAATC 865
Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162
| ||| | || || ||||| ||| | |||||||||||| || | || || | ||
Sbjct 864 GCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATAAG 805
Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222
|| || || || ||||||||||| | ||||| || || || || || | |||||| ||
Sbjct 804 ACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTCTAC 745
Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG---CTGATCCATTT 93279
|||||||| || | | |||||| | || || ||||| | | ||||| |
Sbjct 744 AGCTGCAAAAGCTGCGACACGTTCAGAGAA---TGGAGAATTTGTATCTCCAATCCAGTC 688
Query 93280 TAAAGCCCAAT-CGGCTTTTTTCTTAA----TACAAGGTAGTGTTTCGAT--AGC----- 93327
| |||||| | || ||||||||| | | |||| | | || || |||
Sbjct 687 GAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAAAAA 628
Query 93328 GT---TA------AATAGGTA------ATCTCGCTCGTCC---GAATCTCGTATGTATGT 93369
|| || || || || | || || || ||||||| ||||| ||
Sbjct 627 GTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTAAGT 568
Query 93370 ATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTA 93429
||| || | ||||| |||||||||||||| | |||||| || || ||||| | || ||
Sbjct 567 ATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCCATA 508
Query 93430 GAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATT 93489
||||| | | |||| | |||||| |||||||| ||| | ||| | ||||||||
Sbjct 507 AAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTTCCAA 448
Query 93490 GACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC 93549
||||| ||||| || || ||||| || | | | || ||| || ||| |
Sbjct 447 AACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCTCTCC 388
Query 93550 ATCTTTAAGCTTATCCCAAT-CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCC 93608
||||| || ||||| ||| || ||||| || | ||| ||||| || || ||||
Sbjct 387 CGGCTTAAGTGAATTCCAATGAGGAAAG-TCTTTAGACAAATCAACTTCCTCTACTGTCC 329
Query 93609 AAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668
| || || || | ||||| || || | | ||| ||||| |||| | ||| ||||| |
Sbjct 328 AGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAAACA 269
Query 93669 TGACAAAACG 93678
| ||||| ||
Sbjct 268 TTACAAAGCG 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554658429457520
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