Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq270304 87.8 1e-12 >seq270304 Length=645 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| ||||||||||||| || ||||| || ||| | ||| ||| | || Sbjct 304 ATGCAAATTTTTGTTAAAACATTAACCGGAAAAACTATAACCCTAGAAGTTGAACCGACA 245 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 | || || | || | ||| ||| || ||||| || ||| | || | | || Sbjct 244 AATACTGTCGAAAATGTGAAGGCAAAGATACAAGATAAGGAAGGTATTCCCTCAGATCAG 185 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGAT--TTAAAAACTATGGCCGATTACA 22011 || || ||||| || ||||| || || || |||||| | | ||| | | || || | Sbjct 184 CAAAGGCTTATTTTCGCTGGAAAGCAGCTTGAAGATGGTCGTACACTTT--CTGACTATA 127 Query 22012 ATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| || |||||||||||||||||| | || | ||| | || || || Sbjct 126 ATATACAAAAGGAATCTACTCTTCATCTAGTTCTTCGTCTTCGTGGGGG 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356743834734892