Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 123 2e-23
seq32333 123 2e-23
seq157544 82.4 6e-11
>seq171037
Length=1136
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||||||||| ||||| || |||||| | |||||| ||||| |||||||| ||
Sbjct 985 GTAGATTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCG 926
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | || | || || ||||| || ||||| |||||||| || || || |||
Sbjct 925 GCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTG 866
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| || ||||| | |||||||| |||| || | || ||||| |||||||||
Sbjct 865 ATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTT 806
Query 114366 TTTACAAAAATCTGCATG 114383
|| |||||||||||||||
Sbjct 805 TTAACAAAAATCTGCATG 788
>seq32333
Length=4216
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||||||||| ||||| || |||||| | |||||| ||||| |||||||| ||
Sbjct 3791 GTAGATTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCG 3850
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | || | || || ||||| || ||||| |||||||| || || || |||
Sbjct 3851 GCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTG 3910
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| || ||||| | |||||||| |||| || | || ||||| |||||||||
Sbjct 3911 ATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTT 3970
Query 114366 TTTACAAAAATCTGCATG 114383
|| |||||||||||||||
Sbjct 3971 TTAACAAAAATCTGCATG 3988
>seq157544
Length=1252
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238
||||| || ||||| |||||||||||||| || || ||| ||| ||| || || ||
Sbjct 1236 ATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCTAGCTG 1177
Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298
||| || || | || |||||||| || ||||| || ||||| || || || ||| ||
Sbjct 1176 TTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGAATTTT 1117
Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358
||| | | || | || ||| | || || || || | || | || || || ||
Sbjct 1116 AGCTTTCACATTCTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTTCCAGT 1057
Query 114359 CAGAGTTTTTACAAAAATCTGCATGGCTTAATT 114391
|| || ||||| || || ||||| | || |||
Sbjct 1056 AAGGGTCTTTACGAATATTTGCATCGTTTTATT 1024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418514319477576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |