Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq110960 95.1 3e-14 seq75644 95.1 3e-14 >seq110960 Length=1818 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||||| ||| | ||| | | ||| ||||||| || ||||| ||| | Sbjct 1057 CTGATTGGCATGAACTGTGATATGATGTGCCGCTACCTCGAATTTGTTGCCGATCGCTTG 1116 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | || ||||||||| ||||| | | || | |||| ||||||| ||||||||| Sbjct 1117 CTGTACGAGCTTGGTTACGAGAAGATTTGGAATGCTGAGAATCCCTTTGATTTTATGGAG 1176 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 || ||| | | || ||||| |||||||| || |||||||| | || || ||| Sbjct 1177 AATATCTCGATCGAGGGCAAAACGAACTTCTTTGAGAAGCGTGTTGGGGAATACCAA 1233 >seq75644 Length=2520 Score = 95.1 bits (104), Expect = 3e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||||| ||| | ||| | | ||| ||||||| || ||||| ||| | Sbjct 762 CTGATTGGCATGAACTGTGATATGATGTGCCGTTACCTCGAATTTGTTGCCGATCGCTTG 703 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | || ||||||||| ||||| | | || | |||| ||||||| ||||||||| Sbjct 702 CTATACGAGCTTGGTTACGAGAAGATTTGGAATGCTGAGAATCCCTTTGATTTTATGGAG 643 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAA 243738 || ||| | | || ||||| |||||||| || |||||||| | || || ||| Sbjct 642 AATATCTCGATCGAGGGCAAAACAAACTTCTTTGAGAAGCGTGTTGGGGAATACCAA 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1098409090601300