Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq157544 123 3e-23
seq40145 86.0 7e-12
>seq157544
Length=1252
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||||||||| ||||| || | |||||| || | || |||||||| || || || ||
Sbjct 1223 TCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCTAGCTGTTTGCCTGCAAAA 1164
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| || |||||||| || | ||| | || |||||| ||| ||| |||| | ||| | |
Sbjct 1163 ATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCC-TGAATTTTAGCTTTCACATT 1105
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | ||| |||||||| || || |||| ||||| || || || || || ||||||||
Sbjct 1104 CTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTTCCAGTAAGGGTCTTTAC 1045
Query 42197 AAAGATTTGCAT 42208
|| ||||||||
Sbjct 1044 GAATATTTGCAT 1033
>seq40145
Length=3774
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1227 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1168
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 1167 TACTAACGAGGACTG 1153
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2462 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2403
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 2402 TACTAACGAGGACTG 2388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541064406956320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |