Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq93010 105 7e-18 >seq93010 Length=2134 Score = 105 bits (116), Expect = 7e-18 Identities = 316/487 (65%), Gaps = 2/487 (0%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || | || || || ||| |||||||| ||||| || | | Sbjct 326 CCCCCACTCTCTTTAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCA 385 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||| ||| || |||| || | ||| | | ||||| || | Sbjct 386 CAATGAAGGATGACAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTT 445 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| || ||||| || || | | ||| || | |||| | || ||| |||| | Sbjct 446 CTAAAAGTGCTGGGGGTATTGGTGTAAATGTTCATTGCATACGCGGCACTGGTACCTATA 505 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | ||||| ||||| |||||| || || || || ||| | || || || ||||| Sbjct 506 TTGCTGGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATA 565 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || |||||||| || ||||||||| |||||| ||| | || || ||||||||| Sbjct 566 CTGCTCGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCG 625 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| ||||| | | | ||| | || | || |||||| || || Sbjct 626 AGCCATGGCATACGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAG 685 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315 || | || || || || || || || || ||| | || || || |||||| || | Sbjct 686 AGGTTCGTGCTAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTG 745 Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACG 94375 | ||| || || |||||||||| | ||| | |||||||| || || || || Sbjct 746 TTGAGGCTAATGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCTGGCCTTTCTGA-- 803 Query 94376 TTTGTGG 94382 ||||||| Sbjct 804 TTTGTGG 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492766582112080