Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 105 7e-18
>seq93010
Length=2134
Score = 105 bits (116), Expect = 7e-18
Identities = 316/487 (65%), Gaps = 2/487 (0%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || || || | || || || ||| |||||||| ||||| || | |
Sbjct 326 CCCCCACTCTCTTTAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCA 385
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||| ||| || |||| || | ||| | | ||||| || |
Sbjct 386 CAATGAAGGATGACAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTT 445
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || ||||| || || | | ||| || | |||| | || ||| |||| |
Sbjct 446 CTAAAAGTGCTGGGGGTATTGGTGTAAATGTTCATTGCATACGCGGCACTGGTACCTATA 505
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| ||||| ||||| |||||| || || || || ||| | || || || |||||
Sbjct 506 TTGCTGGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATA 565
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || |||||||| || ||||||||| |||||| ||| | || || |||||||||
Sbjct 566 CTGCTCGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCG 625
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||| ||||| ||||| | | | ||| | || | || |||||| || ||
Sbjct 626 AGCCATGGCATACGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAG 685
Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCG 94315
|| | || || || || || || || || ||| | || || || |||||| || |
Sbjct 686 AGGTTCGTGCTAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTG 745
Query 94316 TCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACG 94375
| ||| || || |||||||||| | ||| | |||||||| || || || ||
Sbjct 746 TTGAGGCTAATGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCTGGCCTTTCTGA-- 803
Query 94376 TTTGTGG 94382
|||||||
Sbjct 804 TTTGTGG 810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 492766582112080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |