Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq171037 95.1 9e-15 seq32333 93.3 3e-14 >seq171037 Length=1136 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || ||||| || || |||||||| || | || | ||||| | ||| Sbjct 764 ATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCGAGTTG 705 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| ||||| | || | | ||||| || |||||| ||||||||||| ||| || Sbjct 704 TTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 645 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||| | ||||| || || || ||| || || | ||||| || || || || Sbjct 644 CGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGTAATTGTCTTTCCAGT 585 Query 15153 CAGAGTTTTTACAAAAATTTGCATATTTGA 15182 ||| ||||| ||||| |||||||| || || Sbjct 584 CAGTGTTTTGACAAATATTTGCATTTTAGA 555 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC--GTCTTCTAATTGTTTGC 15037 ||||| ||||| || || || |||||| || ||| || |||||||| |||||| | Sbjct 985 GTAGATTCTTTCTGAATATTATAATCG--GATAATGTACGACTGTCTTCTAGTTGTTTTC 928 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 | || | || || || || ||||| ||||||||||| || || ||||| || Sbjct 927 CGGCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTT 868 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 | | |||| | || || || ||| || || || ||||| || || || ||||||| Sbjct 867 TGATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAG 808 Query 15158 TTTTTACAAAAATTTGCAT 15176 |||| |||||||| ||||| Sbjct 807 TTTTAACAAAAATCTGCAT 789 >seq32333 Length=4216 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || ||||| || || |||||||| || | || | ||||| | ||| Sbjct 4012 ATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCGAGTTG 4071 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| ||||| | || | | ||||| || |||||| ||||||||||| ||| || Sbjct 4072 TTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 4131 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||| | ||||| || || || ||| || || | ||||| || || || || Sbjct 4132 CGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGTAATTGTCTTTCCAGT 4191 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||||| ||||| |||||||| Sbjct 4192 CAGTGTTTTGACAAATATTTGCAT 4215 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGC--GTCTTCTAATTGTTTGC 15037 ||||| ||||| || || || |||||| || ||| || |||||||| |||||| | Sbjct 3791 GTAGATTCTTTCTGAATATTATAATCG--GATAATGTACGACTGTCTTCTAGTTGTTTTC 3848 Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097 | || | || || || || ||||| ||||||||||| || || ||||| || Sbjct 3849 CGGCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTT 3908 Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157 | | |||| | || || || ||| || || || ||||| || || || ||||||| Sbjct 3909 TGATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAG 3968 Query 15158 TTTTTACAAAAATTTGCAT 15176 |||| |||||||| ||||| Sbjct 3969 TTTTAACAAAAATCTGCAT 3987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356013860485430