Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq150668 105 1e-17 >seq150668 Length=1318 Score = 105 bits (116), Expect = 1e-17 Identities = 254/381 (67%), Gaps = 9/381 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||||||||| ||||| |||||||||| ||||| |||||| || | || || || Sbjct 1146 CTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCCATAAAATCAAACGGATT 1087 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | || | |||| | || || | | ||| | | || |||||||| || Sbjct 1086 TTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGACGATCAGCCACAAACTC 1027 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||||| |||||| | | || || ||||| | || || ||||| | || || | Sbjct 1026 TATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTGACGGGCAAAGCATCAGT 967 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC---TGCGAGACACGTTCGTA 159885 ||||| || | |||||| | || || || || || || || | | ||| Sbjct 966 GAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAATG-GATCCTC-TTCTCT 909 Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 || | |||| |||| | |||||| |||||||| || || ||||| |||||||| Sbjct 908 TCCGGTTTTGC----AATGATATGCTTAAATAGGAGGCAAGCGAAATCGCAATGCAGTCC 853 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || ||| || | ||| ||| | | ||||||| ||||| | |||||| ||| Sbjct 852 CTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATAAGACCACGCTTTTT 793 Query 160006 GAGCCAAAAAATGGCCGCAAA 160026 |||||||| || || ||||| Sbjct 792 AAGCCAAAATATCGCGGCAAA 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 792010381062880