Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 105 1e-17
>seq150668
Length=1318
Score = 105 bits (116), Expect = 1e-17
Identities = 254/381 (67%), Gaps = 9/381 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
|||||||||||| ||||| |||||||||| ||||| |||||| || | || || ||
Sbjct 1146 CTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCCATAAAATCAAACGGATT 1087
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| || | |||| | || || | | ||| | | || |||||||| ||
Sbjct 1086 TTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGACGATCAGCCACAAACTC 1027
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
||||||| |||||| | | || || ||||| | || || ||||| | || || |
Sbjct 1026 TATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTGACGGGCAAAGCATCAGT 967
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC---TGCGAGACACGTTCGTA 159885
||||| || | |||||| | || || || || || || || | | |||
Sbjct 966 GAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAATG-GATCCTC-TTCTCT 909
Query 159886 CCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
|| | |||| |||| | |||||| |||||||| || || ||||| ||||||||
Sbjct 908 TCCGGTTTTGC----AATGATATGCTTAAATAGGAGGCAAGCGAAATCGCAATGCAGTCC 853
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||| || ||| || | ||| ||| | | ||||||| ||||| | |||||| |||
Sbjct 852 CTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATAAGACCACGCTTTTT 793
Query 160006 GAGCCAAAAAATGGCCGCAAA 160026
|||||||| || || |||||
Sbjct 792 AAGCCAAAATATCGCGGCAAA 772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 792010381062880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |