Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq270304 105 2e-17
seq256849 102 2e-16
seq157544 96.9 8e-15
>seq270304
Length=645
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || || || ||||| || |||||||| | || ||||||| | ||
Sbjct 84 CGAAGACGAAGAACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGTA 143
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| ||||||||||| ||||| || || | ||||| || | ||| |||
Sbjct 144 CGACCATCTTCAAGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACCT 203
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || |||||| |||||| |||||| || | ||| | ||| || || |
Sbjct 204 TCCTTATCTTGTATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAGG 263
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || | ||||| |||||||||||
Sbjct 264 GTTATAGTTTTTCCGGTTAATGTTTTAACAAAAATTTG 301
>seq256849
Length=689
Score = 102 bits (112), Expect = 2e-16
Identities = 83/101 (82%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| ||||| || |||||||| | ||||||||| | |||||| | |||||
Sbjct 627 AGGACAAGGTGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAAAGTGCGACCATCC 568
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| || || || || |||||||||||||| ||
Sbjct 567 TCTAGCTGCTTGCCTGCAAAAATTAGACGCTGCTGGTCTGG 527
>seq157544
Length=1252
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||| || ||||| || |||||||| | ||||||||| | || ||| | |||||
Sbjct 1244 AGGACAAGATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCC 1185
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||| || || || || || ||||||||||| ||||| || || || |||
Sbjct 1184 TCTAGCTGTTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCC 1125
Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||| ||| || ||||| || | || || | | || || || | ||||| ||
Sbjct 1124 TGAAT-TTTAGCTTTCACATTCTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGT 1066
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || || || || |||||
Sbjct 1065 CTTTCCAGTAAGGGTCTTTACGAATATTTG 1036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1174142429408666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |