Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq133394 178 5e-39
seq140775 158 5e-33
seq171037 131 7e-25
seq32333 131 7e-25
seq90801 129 2e-24
seq270304 102 3e-16
>seq133394
Length=1506
Score = 178 bits (196), Expect = 5e-39
Identities = 240/333 (72%), Gaps = 15/333 (5%)
Strand=Plus/Minus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|| ||||||||||| || ||| | ||| |||| || ||| | ||||| ||||||
Sbjct 1506 AAGATGAAAGAAACCGCTGAAAACTATCTTGGAGAAAAGGTAACTCAAGCAGTTATTACT 1447
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || |||||||| |||||||| ||||| ||||||||||| || || ||| | |||||
Sbjct 1446 GTACCAGCTTATTTTAATGATGCTCAACGTCAAGCAACTAAGGACGCTGGAAAAATTGCC 1387
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453
|||||| | || | ||||||| |||||||| ||||| ||||| |||||||||| |
Sbjct 1386 GGTTTAGAAGTATTAAGAATTATCAATGAACCAACAGCTGCTGCATTAGCATATGGTTTT 1327
Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513
| ||| | || | |||| |||| | |||| |||||| |||||||| ||
Sbjct 1326 GATAAAGCTGAA-------AGTAAAATAATAGCT--GTATATGATTTAGGTGGAGGTACA 1276
Query 451514 CATGATACTTCTGTACTTTCA---ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
||| | || | ||| | |||| ||||||||||||| || || | ||||||
Sbjct 1275 TTTGACATATC---AATTTTAGAGATTGGTAATGGGGTATTTGAGGTCAAATCTACCAAT 1219
Query 451571 GGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603
||| |||| |||||||| |||||| |||||
Sbjct 1218 GGTAATACGTTCCTAGGAGGAGAAGATTTTGAT 1186
>seq140775
Length=1422
Score = 158 bits (174), Expect = 5e-33
Identities = 259/372 (70%), Gaps = 6/372 (2%)
Strand=Plus/Plus
Query 451226 GAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAA 451285
|| || || ||||||||||| ||||| || || | ||||||||| ||| ||||||||
Sbjct 395 GAGACCAAGACTTTTGCTCCAGAAGAGATATCCGCCATGGTTCTTGGTAAGATGAAAGAC 454
Query 451286 ACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTAT 451345
| || ||| || |||| ||| || | || ||| ||||||| || || ||
Sbjct 455 ATTGCTGAAGCCTACCTTGGAAAGAAAGTGACACACGCCGTAGTTACTGTCCCTGCGTAC 514
Query 451346 TTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTT 451405
||||| ||||| ||||| || || || || || || || ||| | ||| | || |||
Sbjct 515 TTCAACGATGCTCAACGCCAGGCTACCAAGGACGCTGGCGTCATTTCCGGTCTTAACGTT 574
Query 451406 CTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA 451465
| |||||||| ||||| ||||| || || || |||||||||| |||| || ||||
Sbjct 575 TTGCGAATTATCAATGAGCCTACTGCCGCAGCCATAGCATATGGTCTAG----ATAAAAA 630
Query 451466 GAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCT 451525
| | | |||| || || || || |||||| | ||||| || ||| ||| |||
Sbjct 631 GGATGGGGAGAAGAACATCCTT--GTCTTTGATCTAGGTGGTGGTACTTTTGACGTATCT 688
Query 451526 GTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTA 451585
| ||| | ||||| |||| || || || || || || | |||||| || |||||
Sbjct 689 CTCCTTACTATTGACAATGGTGTTTTCGAGGTGGTTGCTACTAGTGGTGACACCCATCTT 748
Query 451586 GGAGGTGAAGAT 451597
|| |||||||||
Sbjct 749 GGCGGTGAAGAT 760
>seq171037
Length=1136
Score = 131 bits (144), Expect = 7e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105
|| |||| | || || || |||||||||||||| || || ||||||||||| || |||||
Sbjct 557 TAAAATGCAAATATTTGTCAAAACACTGACTGGAAAGACAATTACTCTTGAAGTGGAATC 616
Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165
| ||| | || || | || || |||||||| |||||||| ||||| |||||
Sbjct 617 AAGTGACACAATAGAGAACGTAAAGTCGAAGATTCAAGACAAGGAAGGTATTCCACCTGA 676
Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225
||||||| | | ||||| | || |||||||| |||||||| || || | | |||||
Sbjct 677 TCAACAAAGGCTTATTTTTGCTGGAAAACAACTCGAAGATGGCAGGACCCTATCAGATTA 736
Query 391226 TAATATTGATAAGGATGCAACACTTCA 391252
|||||| | || || |||| |||||
Sbjct 737 CAATATTCAGAAAGAGTCAACTCTTCA 763
Score = 131 bits (144), Expect = 7e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| ||||| || || || |||||| | || || |||||| |
Sbjct 789 ATGCAGATTTTTGTTAAAACTCTGACGGGCAAGACAATTACTTTGGAAGTCGAATCAAGT 848
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | | ||| || ||| ||||| |||||||| ||||||||||| ||||| ||
Sbjct 849 GACACAGTGGAAAACATCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCCCCTGACCAG 908
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| |||||||| | || |||||||| ||||| | | || || | |||||||||
Sbjct 909 CAACGATTAATTTTTGCCGGAAAACAACTAGAAGACAGTCGTACATTATCCGATTATAAT 968
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
||| | || || | || | ||| | || ||||||| || |||
Sbjct 969 ATTCAGAAAGAATCTACTTTGCACCTGGTGCTAAGACTCAGGGGA 1013
>seq32333
Length=4216
Score = 131 bits (144), Expect = 7e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| ||||| || || || |||||| | || || |||||| |
Sbjct 3987 ATGCAGATTTTTGTTAAAACTCTGACGGGCAAGACAATTACTTTGGAAGTCGAATCAAGT 3928
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | | ||| || ||| ||||| |||||||| ||||||||||| ||||| ||
Sbjct 3927 GACACAGTGGAAAACATCAAAGCTAAAATCCAAGATAAAGAAGGAATTCCCCCTGACCAG 3868
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| |||||||| | || |||||||| ||||| | | || || | |||||||||
Sbjct 3867 CAACGATTAATTTTTGCCGGAAAACAACTAGAAGACAGTCGTACATTATCCGATTATAAT 3808
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
||| | || || | || | ||| | || ||||||| || |||
Sbjct 3807 ATTCAGAAAGAATCTACTTTGCACCTGGTGCTAAGACTCAGGGGA 3763
Score = 129 bits (142), Expect = 2e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | || || || |||||||||||||| || || ||||||||||| || ||||||
Sbjct 4216 AATGCAAATATTTGTCAAAACACTGACTGGAAAGACAATTACTCTTGAAGTGGAATCAAG 4157
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||| | || || | || || |||||||| |||||||| ||||| ||||||||
Sbjct 4156 TGACACAATAGAGAACGTAAAGTCGAAGATTCAAGACAAGGAAGGTATTCCACCTGATCA 4097
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|||| | | ||||| | || |||||||| |||||||| || || | | ||||| ||
Sbjct 4096 ACAAAGGCTTATTTTTGCTGGAAAACAACTCGAAGATGGCAGGACCCTATCAGATTACAA 4037
Query 391229 TATTGATAAGGATGCAACACTTCA 391252
|||| | || || |||| |||||
Sbjct 4036 TATTCAGAAAGAGTCAACTCTTCA 4013
>seq90801
Length=2179
Score = 129 bits (142), Expect = 2e-24
Identities = 248/361 (69%), Gaps = 5/361 (1%)
Strand=Plus/Plus
Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302
||| ||||| || || || ||||| | || ||||||||||| || || ||| ||| |
Sbjct 1506 TCCCGAAGAGATATCCTCCATGGTGTTAACAAAAATGAAAGAGACGGCCGAAGCCTATTT 1565
Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362
|| | || | || ||||| ||||| || || |||||||||| |||| |||||
Sbjct 1566 AGGAGTAACTGTCTCGGAGGCAGTGATTACAGTGCCTGCTTATTTCAGTGATAGCCAACG 1625
Query 451363 GCAAGCAACTAAAGATGCAGGACAT-ATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421
|| || || || ||||| || ||| || ||||| | || ||||| || ||||| ||||
Sbjct 1626 TCAGGCGACCAAGGATGCCGG-CATCATCGCTGGACTTAACGTTCTGCGCATTATAAATG 1684
Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481
| || || || || || | |||||||| || | ||| || | || ||| ||
Sbjct 1685 AGCCGACTGCCGCCGCCATCGCATATGGTCTCGACAAA--AACATCAA-AGATGAGCGCG 1741
Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541
| | | || |||||||| ||||| || || |||| ||||| ||| || |||
Sbjct 1742 TTGTCCTCGTCTTTGATTTAGGTGGGGGGACCTTTGATGTATCTGTTCTTGTTATAGAAA 1801
Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601
|||| |||||||||| | || || || |||||| ||||| |||||||| |||
Sbjct 1802 ATGGCATATTTGAAGTGTATGCGACTGCCGGAGATACTAGGCTAGGCGGTGAAGACTTTG 1861
Query 451602 A 451602
|
Sbjct 1862 A 1862
>seq270304
Length=645
Score = 102 bits (112), Expect = 3e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| ||||||||| | || || |||||||| || || || |||||| | |
Sbjct 304 ATGCAAATTTTTGTTAAAACATTAACCGGAAAAACTATAACCCTAGAAGTTGAACCGACA 245
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
||| | ||| | | || ||| || |||||||||||||| ||||| | |||||
Sbjct 244 AATACTGTCGAAAATGTGAAGGCAAAGATACAAGATAAGGAAGGTATTCCCTCAGATCAG 185
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | |||||| | || || || ||||||||||| | || | | || ||||||
Sbjct 184 CAAAGGCTTATTTTCGCTGGAAAGCAGCTTGAAGATGGTCGTACACTTTCTGACTATAAT 125
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || ||||| ||||
Sbjct 124 ATACAAAAGGAATCTACTCTTCATCTAGT 96
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1967709135198984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |