Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq52071 242 5e-59 seq237940 172 7e-38 seq140775 141 1e-28 seq90801 138 1e-27 seq150668 120 4e-22 seq75644 105 8e-18 seq110960 96.9 4e-15 >seq52071 Length=3253 Score = 242 bits (268), Expect = 5e-59 Identities = 662/1010 (66%), Gaps = 8/1010 (1%) Strand=Plus/Minus Query 7080 TCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCG 7139 ||||||| || ||| | || | ||| ||| | | || || || ||||| || || | Sbjct 3253 TCAGTTCCTTGCCGCTGAAGAAGTCCTGTAAGAGCTTCTGGATCTTGGGGATACGAGTAG 3194 Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199 | |||||||| | || || || | || |||||||||| ||||| || || | | Sbjct 3193 AGCCACCGACTAGTACAATATCGTGAACGGCGGATTTATCGAGCTTTGCATCGCGTAAGG 3134 Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 |||||||| || |||| | | ||||| | || | ||| ||||| || | | Sbjct 3133 ACTTTTCGACCGGATCCAGAGTGCTGCGGAAGAGATCGGCATTCAGCTCCTCGAACCTAG 3074 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 | ||||| | || || || || || | ||||||||| | |||||||| |||| | | | Sbjct 3073 CTCGGGTGACAGAGGTGTAAAAGTCTATGCCGTCGTAGAGGGAATCAATCTCAACGTTGG 3014 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 || || | || | || | ||| || || ||||| ||||| | | ||| || | Sbjct 3013 CCTGCGCGCTGGAGCTGAGAGTCCTCTTAGCTCGTTCACAAGCCGTCCTAAGACGTCGGA 2954 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 || ||| |||| | | || || ||||| | || || || ||||||| || | Sbjct 2953 CTGCTCGCTTGTTATCAGTGATGTCCTTCTTGTACTTTCGCTTGAACTCTTGTACAAAAT 2894 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 | | | ||| || || || ||||| || | || || || || || || | | Sbjct 2893 GATTGACCATTCTATTGTCAAAGTCCTCACCGCCGAGATGGGTGTCACCGGCCGTGGACT 2834 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 |||| || |||||||| | || || | || | || ||||| || || ||||| || | Sbjct 2833 TGACCTCGAAGATACCATCCTCGATTGTCAATATGGAGACATCGAAGGTGCCACCGCCAA 2774 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 | ||||| || | ||||| || || | ||||| || | ||||| || |||| Sbjct 2773 GATCAAAGATCAAGACGTTACGCTCACAACCTATCTTCTTGTCTAAGCCGTAGGCAATAG 2714 Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 | || ||||| ||||| || || || | || ||| ||||| || ||||| || | ||| Sbjct 2713 CAGCGGCCGTAGGTTCGTTGATTATCCTGAGTACA-TTCAGACCGGCAATCGTACCAGCA 2655 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || || || ||||| || || ||||| ||||||||||| || || || || ||||| Sbjct 2654 TCCTTAGTAGCTTGACGCTGACTGTCGTTGAAGTAGGCCGGAACAGTGACAACAGCGTCG 2595 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798 ||||| |||| |||||||||| ||||||| | || ||||| ||| | |||||||| || Sbjct 2594 GTGACAGTCTTGCCGAGATACGCTTCCGCGGTTTCCTTCATCTTGATGAGAACCATGGAA 2535 Query 7799 GAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGT 7858 || || ||||| | || ||| | || || | | ||| | ||| | || Sbjct 2534 GAGATTTCTTCGGGATAGAAGGTTTTATCGGCGCCCCTATAGTTAACCTTGATCTTCGGC 2475 Query 7859 TTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGT 7918 || | | | || | || | | ||||||| ||||| ||||| ||||| | Sbjct 2474 TT---CCCTCCTTCGCTAACGACGGTGAAGGACCAATGCTTCATGTCGTCCTGGACGGGA 2418 Query 7919 TGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTC 7978 ||| ||| ||| || || | ||||| || || || || || || | |||||| Sbjct 2417 GCATCCTCGAACCGTCTGCCTATTAAGCGCTTGGCGTCGAAGACAGTATTGCTAGGGTTC 2358 Query 7979 ATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCG 8038 ||||| || ||||| || || || ||||| || ||||| | || ||||| ||| Sbjct 2357 ATGGCGACCTGATTCTTTGCAGCATCACCGATTAGGCGTTC---GGTGTCAGTAAAGGCG 2301 Query 8039 ACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || || || | || ||||| || || || |||||||| || Sbjct 2300 ACATAGCTAGGAGTGGTCCTGTTGCCTTGATCATTTGCGATAATTTCAAC 2251 >seq237940 Length=756 Score = 172 bits (190), Expect = 7e-38 Identities = 414/617 (67%), Gaps = 16/617 (3%) Strand=Plus/Plus Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT-TGT-----TC 7597 ||||| || || |||| |||||| ||||| || ||| || | | ||| || Sbjct 1 AACGTCCCGCCGCCCAAGTCAAAGATGAGCACATTCCGCTCACCTGATCGTGTGCCCCTC 60 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTT 7656 || || || ||||||||||| || || ||||| || ||||| || || || || ||| || Sbjct 61 TTGTCCAGTCCGTACGCGATTGCGGCTGCCGTCGGCTCATTGATGATGCGCAGCACA-TT 119 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 ||| || || || | ||| || || ||||| || ||||| || || |||||||| Sbjct 120 CAGCCCCGCGATTGCGCCCGAGTCCTTTGTCGCCTGGCGTTGACTGTCATTGAAGTAGGC 179 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||| || || || || || ||| | || || || || | ||||| || || | || || Sbjct 180 CGGCACAGTGACCACGGCATCCATCACCTTTTTGCCCAAATACGCCTCTGCCGTCTCCTT 239 Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836 ||| || || ||||| || |||||||| |||| || ||| ||| | || ||| Sbjct 240 CATCTTTAACAGCACCATTGACGAAATCTCCTCAGGCGAGAACACCTTCTTCTCTCCGCG 299 Query 7837 AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATC 7896 | || || | | ||| | ||| | | | |||| |||| | ||| ||| | Sbjct 300 GTACTCGACACGCACTTTCGGTCT-TCCCC--CCTCTTGGATCACCTCAAACGGCCAGTG 356 Query 7897 TTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT 7955 ||||| || || | ||| || | ||| ||| |||| ||||| || ||||| |||| Sbjct 357 CTTCATGTCTTCACGAACC-GTCGTGTCGTCGAACCTTCTGCCGATCAGGCGCTTCGCAT 415 Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 | || || || || | || ||||| || || ||||| ||||| || || || |||| Sbjct 416 CGAACACCGTATTCGTCGGATTCATTGCCACCTGATTCTTGGCCGCATCGCCAATCAGAC 475 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 | || || ||||| || || ||||| || || || || || || || || |||| Sbjct 476 GCTCTGTA---TCCGTGAAGGCCACGTAACTCGGCGTTGTACGGTTTCCCTGATCATTCG 532 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 | || || || || | ||| || |||| ||| |||||| ||||| || || || | Sbjct 533 CGATGATCTCAACCTTGCCGTGCTGGAAGACACCGGTGCACGAGTACGTCGTGCCCAAGT 592 Query 8136 CAATACCGATTGCTTGA 8152 | |||||||| ||| || Sbjct 593 CGATACCGATGGCTGGA 609 >seq140775 Length=1422 Score = 141 bits (156), Expect = 1e-28 Identities = 251/363 (69%), Gaps = 5/363 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||||||||| || | || || || || || || || || || | ||| Sbjct 765 TCGAAATCTTCACCGCCAAGATGGGTGTCACCACTAGTAGCAACCACCTCGAAAACACCA 706 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||| | | | || || ||||| ||||||||||| || ||||| | || | | Sbjct 705 TTGTCAATAGTAAGGAGAGATACGTCAAAAGTACCACCACCTAGATCAAAGACAAGGATG 646 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || | || || ||||| ||||| || || || || || || || || ||| Sbjct 645 TTCTTCTCCCCATC---CTTTTTATCTAGACCATATGCTATGGCTGCGGCAGTAGGCTCA 589 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || ||||| || | | ||| || || | ||| | ||| || || || || || || || Sbjct 588 TTGATAATTCGCAAAACGTTAAGACCGGAAAT-GACGCCAGCGTCCTTGGTAGCCTGGCG 530 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | |||||| ||||| || ||||| || || || |||| || |||||||| || || Sbjct 529 TTGAGCATCGTTGAAGTACGCAGGGACAGTAACTACGGCGTGTGTCACTTTCTTTCCAAG 470 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | ||| || || |||||||| || ||||||||| | || |||||||| | || Sbjct 469 GTAGGCTTCAGCAATGTCTTTCATCTTACCAAGAACCATGGCGGATATCTCTTCTGGAGC 410 Query 7816 AAA 7818 ||| Sbjct 409 AAA 407 >seq90801 Length=2179 Score = 138 bits (152), Expect = 1e-27 Identities = 384/575 (67%), Gaps = 18/575 (3%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || || || || ||||| | | | || | ||||||||| || ||||| | || | ||| Sbjct 2075 AGCTCTTCGAATCGTGCCCTGCTTATTGTTGTATAGAAGTCTACGCCATTATACAGAGAA 2016 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 || | || ||| | | ||||| | ||| | ||| | || || || ||||| ||| Sbjct 2015 TCTACCTCTATGTTGGCCTGTGCACTAGAACTGAGCGTCCTTTTGGCACGTTCACATGCC 1956 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 |||| | |||||||| || | | ||| | ||||| || || || || | Sbjct 1955 GTTCTGAGACGACGAACTGCTCTCTTATTAGATGTGATATCCTTGCCATACTTTTTTTGA 1896 Query 7424 AACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 ||||| | | ||| | ||| | | || || || |||||||| || | || Sbjct 1895 AACTCCTTAATGAAATAGTCCACC-ATCCTATCGTCAAAGTCTTCACCGCCTAGCCTAGT 1837 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC-GAAACAT 7541 ||| || || ||||| | |||||||| || || ||| || || ||| || |||| Sbjct 1836 ATCTCCGGCAGTCGCATACACTTCAAATATGCCATTTTCTATAAC-AAGAACAGATACAT 1778 Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTG---TTC 7597 |||| || || ||||| | ||||| | ||| || || || || |||||| || Sbjct 1777 CAAAGGTCCCCCCACCTAAATCAAAGACGAGGACAA-CG---CGCTCATCTTTGATGTTT 1722 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 || |||||||| || ||||| || || || || || ||||| ||||| || ||| ||| Sbjct 1721 TTGTCGAGACCATATGCGATGGCGGCGGCAGTCGGCTCATTTATAATGCGCAGAACGTTA 1662 Query 7658 AGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || ||||| || | ||||| |||| || ||||| || ||||| ||| | || || || Sbjct 1661 AGTCCAGCGAT-GATGCCGGCATCCTTGGTCGCCTGACGTTGGCTATCACTGAAATAAGC 1603 Query 7717 CGGGACCGTTACGACCGCGTCCGTGAC--TTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || | || || |||| ||| || || || | ||| | ||| || | ||| Sbjct 1602 AGGCACTGTAATCACTGCCTCCGAGACAGTTACT--CCTAAATAGGCTTCGGCCGTCTCT 1545 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||||| || | ||||| || || |||||||| Sbjct 1544 TTCATTTTTGTTAACACCATGGAGGATATCTCTTC 1510 >seq150668 Length=1318 Score = 120 bits (132), Expect = 4e-22 Identities = 331/501 (66%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122 || || || |||||||| || ||||| || |||||||| || || |||||||| |||||| Sbjct 1160 TATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCCATA 1101 Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGA---TAAT 115179 |||||||| ||||||| | |||||| || || |||| ||| | ||| || | Sbjct 1100 AAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAA---GTTCAGACAGAAGA 1044 Query 115180 CGATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTA 115239 ||||| || ||| | || || || |||| | || ||||||| || |||||||| Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 115240 CACGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCT 115299 || | || || || | ||||||| || ||| || || || || || Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 115300 TCAATTGTATTTTGAGATGGTTTGTTTTTTAACATG-TTGAATA--ATTCAACCGCAAAT 115356 | || | || | ||||| | | | ||| || |||| | ||| || || Sbjct 923 TGGATCCTCTTCTCTTCCGGTTT-TGCAATGATATGCTTAAATAGGAGGCAA--GCGAAA 867 Query 115357 TCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGT 115416 || |||| || |||||||||||||| || ||||| || || | || || | Sbjct 866 TCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATA 807 Query 115417 AACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCA 115476 | || | |||||| | |||||| || || ||| || || |||||||| | |||||| Sbjct 806 AGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTCT 747 Query 115477 ACACACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTAT---CAAACCACTTC 115533 ||| ||||| ||| | |||||||| ||||| || ||| ||| ||| | Sbjct 746 ACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCAGTCG 687 Query 115534 ATAGCCCATTTCGCCTTTCTT 115554 | |||||||| ||||||| || Sbjct 686 AGAGCCCATTGCGCCTTTTTT 666 >seq75644 Length=2520 Score = 105 bits (116), Expect = 8e-18 Identities = 107/137 (78%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122 || || || || ||||| ||||| |||||||||||||| |||| || |||||||||||| Sbjct 590 TATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATTCTCCATA 649 Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCA-CTTGTTTTGATAATCG 115181 |||||||||||||| | | ||||| || || | || ||| | || || | | || || Sbjct 650 AAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG-CAAGCG 708 Query 115182 ATCCGCAACATATTCGA 115198 ||| |||||| |||||| Sbjct 709 ATCGGCAACAAATTCGA 725 >seq110960 Length=1818 Score = 96.9 bits (106), Expect = 4e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122 || || || || ||||| ||||| ||||| |||||||| |||| || |||||||||||| Sbjct 1229 TATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATTCTCCATA 1170 Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCA-CTTGTTTTGATAATCG 115181 |||||||||||||| | | ||||| || || | || ||| | || || | || || Sbjct 1169 AAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG-CAAGCG 1111 Query 115182 ATCCGCAACATATTCGA 115198 ||| |||||| |||||| Sbjct 1110 ATCGGCAACAAATTCGA 1094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632620865654320