Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq52071 242 5e-59
seq237940 172 7e-38
seq140775 141 1e-28
seq90801 138 1e-27
seq150668 120 4e-22
seq75644 105 8e-18
seq110960 96.9 4e-15
>seq52071
Length=3253
Score = 242 bits (268), Expect = 5e-59
Identities = 662/1010 (66%), Gaps = 8/1010 (1%)
Strand=Plus/Minus
Query 7080 TCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCG 7139
||||||| || ||| | || | ||| ||| | | || || || ||||| || || |
Sbjct 3253 TCAGTTCCTTGCCGCTGAAGAAGTCCTGTAAGAGCTTCTGGATCTTGGGGATACGAGTAG 3194
Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199
| |||||||| | || || || | || |||||||||| ||||| || || | |
Sbjct 3193 AGCCACCGACTAGTACAATATCGTGAACGGCGGATTTATCGAGCTTTGCATCGCGTAAGG 3134
Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259
|||||||| || |||| | | ||||| | || | ||| ||||| || | |
Sbjct 3133 ACTTTTCGACCGGATCCAGAGTGCTGCGGAAGAGATCGGCATTCAGCTCCTCGAACCTAG 3074
Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319
| ||||| | || || || || || | ||||||||| | |||||||| |||| | | |
Sbjct 3073 CTCGGGTGACAGAGGTGTAAAAGTCTATGCCGTCGTAGAGGGAATCAATCTCAACGTTGG 3014
Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379
|| || | || | || | ||| || || ||||| ||||| | | ||| || |
Sbjct 3013 CCTGCGCGCTGGAGCTGAGAGTCCTCTTAGCTCGTTCACAAGCCGTCCTAAGACGTCGGA 2954
Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439
|| ||| |||| | | || || ||||| | || || || ||||||| || |
Sbjct 2953 CTGCTCGCTTGTTATCAGTGATGTCCTTCTTGTACTTTCGCTTGAACTCTTGTACAAAAT 2894
Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499
| | | ||| || || || ||||| || | || || || || || || | |
Sbjct 2893 GATTGACCATTCTATTGTCAAAGTCCTCACCGCCGAGATGGGTGTCACCGGCCGTGGACT 2834
Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559
|||| || |||||||| | || || | || | || ||||| || || ||||| || |
Sbjct 2833 TGACCTCGAAGATACCATCCTCGATTGTCAATATGGAGACATCGAAGGTGCCACCGCCAA 2774
Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619
| ||||| || | ||||| || || | ||||| || | ||||| || ||||
Sbjct 2773 GATCAAAGATCAAGACGTTACGCTCACAACCTATCTTCTTGTCTAAGCCGTAGGCAATAG 2714
Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCA 7678
| || ||||| ||||| || || || | || ||| ||||| || ||||| || | |||
Sbjct 2713 CAGCGGCCGTAGGTTCGTTGATTATCCTGAGTACA-TTCAGACCGGCAATCGTACCAGCA 2655
Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738
|| || || ||||| || || ||||| ||||||||||| || || || || |||||
Sbjct 2654 TCCTTAGTAGCTTGACGCTGACTGTCGTTGAAGTAGGCCGGAACAGTGACAACAGCGTCG 2595
Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798
||||| |||| |||||||||| ||||||| | || ||||| ||| | |||||||| ||
Sbjct 2594 GTGACAGTCTTGCCGAGATACGCTTCCGCGGTTTCCTTCATCTTGATGAGAACCATGGAA 2535
Query 7799 GAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGT 7858
|| || ||||| | || ||| | || || | | ||| | ||| | ||
Sbjct 2534 GAGATTTCTTCGGGATAGAAGGTTTTATCGGCGCCCCTATAGTTAACCTTGATCTTCGGC 2475
Query 7859 TTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGT 7918
|| | | | || | || | | ||||||| ||||| ||||| ||||| |
Sbjct 2474 TT---CCCTCCTTCGCTAACGACGGTGAAGGACCAATGCTTCATGTCGTCCTGGACGGGA 2418
Query 7919 TGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTC 7978
||| ||| ||| || || | ||||| || || || || || || | ||||||
Sbjct 2417 GCATCCTCGAACCGTCTGCCTATTAAGCGCTTGGCGTCGAAGACAGTATTGCTAGGGTTC 2358
Query 7979 ATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCG 8038
||||| || ||||| || || || ||||| || ||||| | || ||||| |||
Sbjct 2357 ATGGCGACCTGATTCTTTGCAGCATCACCGATTAGGCGTTC---GGTGTCAGTAAAGGCG 2301
Query 8039 ACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088
|| || || || || | || ||||| || || || |||||||| ||
Sbjct 2300 ACATAGCTAGGAGTGGTCCTGTTGCCTTGATCATTTGCGATAATTTCAAC 2251
>seq237940
Length=756
Score = 172 bits (190), Expect = 7e-38
Identities = 414/617 (67%), Gaps = 16/617 (3%)
Strand=Plus/Plus
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTT-TGT-----TC 7597
||||| || || |||| |||||| ||||| || ||| || | | ||| ||
Sbjct 1 AACGTCCCGCCGCCCAAGTCAAAGATGAGCACATTCCGCTCACCTGATCGTGTGCCCCTC 60
Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTT 7656
|| || || ||||||||||| || || ||||| || ||||| || || || || ||| ||
Sbjct 61 TTGTCCAGTCCGTACGCGATTGCGGCTGCCGTCGGCTCATTGATGATGCGCAGCACA-TT 119
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
||| || || || | ||| || || ||||| || ||||| || || ||||||||
Sbjct 120 CAGCCCCGCGATTGCGCCCGAGTCCTTTGTCGCCTGGCGTTGACTGTCATTGAAGTAGGC 179
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776
||| || || || || || ||| | || || || || | ||||| || || | || ||
Sbjct 180 CGGCACAGTGACCACGGCATCCATCACCTTTTTGCCCAAATACGCCTCTGCCGTCTCCTT 239
Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836
||| || || ||||| || |||||||| |||| || ||| ||| | || |||
Sbjct 240 CATCTTTAACAGCACCATTGACGAAATCTCCTCAGGCGAGAACACCTTCTTCTCTCCGCG 299
Query 7837 AAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATC 7896
| || || | | ||| | ||| | | | |||| |||| | ||| ||| |
Sbjct 300 GTACTCGACACGCACTTTCGGTCT-TCCCC--CCTCTTGGATCACCTCAAACGGCCAGTG 356
Query 7897 TTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT 7955
||||| || || | ||| || | ||| ||| |||| ||||| || ||||| ||||
Sbjct 357 CTTCATGTCTTCACGAACC-GTCGTGTCGTCGAACCTTCTGCCGATCAGGCGCTTCGCAT 415
Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015
| || || || || | || ||||| || || ||||| ||||| || || || ||||
Sbjct 416 CGAACACCGTATTCGTCGGATTCATTGCCACCTGATTCTTGGCCGCATCGCCAATCAGAC 475
Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075
| || || ||||| || || ||||| || || || || || || || || ||||
Sbjct 476 GCTCTGTA---TCCGTGAAGGCCACGTAACTCGGCGTTGTACGGTTTCCCTGATCATTCG 532
Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135
| || || || || | ||| || |||| ||| |||||| ||||| || || || |
Sbjct 533 CGATGATCTCAACCTTGCCGTGCTGGAAGACACCGGTGCACGAGTACGTCGTGCCCAAGT 592
Query 8136 CAATACCGATTGCTTGA 8152
| |||||||| ||| ||
Sbjct 593 CGATACCGATGGCTGGA 609
>seq140775
Length=1422
Score = 141 bits (156), Expect = 1e-28
Identities = 251/363 (69%), Gaps = 5/363 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||||||||| || | || || || || || || || || || | |||
Sbjct 765 TCGAAATCTTCACCGCCAAGATGGGTGTCACCACTAGTAGCAACCACCTCGAAAACACCA 706
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||||| | | | || || ||||| ||||||||||| || ||||| | || | |
Sbjct 705 TTGTCAATAGTAAGGAGAGATACGTCAAAAGTACCACCACCTAGATCAAAGACAAGGATG 646
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
||| | || | || || ||||| ||||| || || || || || || || || |||
Sbjct 645 TTCTTCTCCCCATC---CTTTTTATCTAGACCATATGCTATGGCTGCGGCAGTAGGCTCA 589
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|| ||||| || | | ||| || || | ||| | ||| || || || || || || ||
Sbjct 588 TTGATAATTCGCAAAACGTTAAGACCGGAAAT-GACGCCAGCGTCCTTGGTAGCCTGGCG 530
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||| | |||||| ||||| || ||||| || || || |||| || |||||||| || ||
Sbjct 529 TTGAGCATCGTTGAAGTACGCAGGGACAGTAACTACGGCGTGTGTCACTTTCTTTCCAAG 470
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
|| | ||| || || |||||||| || ||||||||| | || |||||||| | ||
Sbjct 469 GTAGGCTTCAGCAATGTCTTTCATCTTACCAAGAACCATGGCGGATATCTCTTCTGGAGC 410
Query 7816 AAA 7818
|||
Sbjct 409 AAA 407
>seq90801
Length=2179
Score = 138 bits (152), Expect = 1e-27
Identities = 384/575 (67%), Gaps = 18/575 (3%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| || || || ||||| | | | || | ||||||||| || ||||| | || | |||
Sbjct 2075 AGCTCTTCGAATCGTGCCCTGCTTATTGTTGTATAGAAGTCTACGCCATTATACAGAGAA 2016
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
|| | || ||| | | ||||| | ||| | ||| | || || || ||||| |||
Sbjct 2015 TCTACCTCTATGTTGGCCTGTGCACTAGAACTGAGCGTCCTTTTGGCACGTTCACATGCC 1956
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
|||| | |||||||| || | | ||| | ||||| || || || || |
Sbjct 1955 GTTCTGAGACGACGAACTGCTCTCTTATTAGATGTGATATCCTTGCCATACTTTTTTTGA 1896
Query 7424 AACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482
||||| | | ||| | ||| | | || || || |||||||| || | ||
Sbjct 1895 AACTCCTTAATGAAATAGTCCACC-ATCCTATCGTCAAAGTCTTCACCGCCTAGCCTAGT 1837
Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC-GAAACAT 7541
||| || || ||||| | |||||||| || || ||| || || ||| || ||||
Sbjct 1836 ATCTCCGGCAGTCGCATACACTTCAAATATGCCATTTTCTATAAC-AAGAACAGATACAT 1778
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTTG---TTC 7597
|||| || || ||||| | ||||| | ||| || || || || |||||| ||
Sbjct 1777 CAAAGGTCCCCCCACCTAAATCAAAGACGAGGACAA-CG---CGCTCATCTTTGATGTTT 1722
Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
|| |||||||| || ||||| || || || || || ||||| ||||| || ||| |||
Sbjct 1721 TTGTCGAGACCATATGCGATGGCGGCGGCAGTCGGCTCATTTATAATGCGCAGAACGTTA 1662
Query 7658 AGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
|| ||||| || | ||||| |||| || ||||| || ||||| ||| | || || ||
Sbjct 1661 AGTCCAGCGAT-GATGCCGGCATCCTTGGTCGCCTGACGTTGGCTATCACTGAAATAAGC 1603
Query 7717 CGGGACCGTTACGACCGCGTCCGTGAC--TTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || | || || |||| ||| || || || | ||| | ||| || | |||
Sbjct 1602 AGGCACTGTAATCACTGCCTCCGAGACAGTTACT--CCTAAATAGGCTTCGGCCGTCTCT 1545
Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|||||||| || | ||||| || || ||||||||
Sbjct 1544 TTCATTTTTGTTAACACCATGGAGGATATCTCTTC 1510
>seq150668
Length=1318
Score = 120 bits (132), Expect = 4e-22
Identities = 331/501 (66%), Gaps = 15/501 (3%)
Strand=Plus/Minus
Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122
|| || || |||||||| || ||||| || |||||||| || || |||||||| ||||||
Sbjct 1160 TATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCCATA 1101
Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGA---TAAT 115179
|||||||| ||||||| | |||||| || || |||| ||| | ||| || |
Sbjct 1100 AAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAA---GTTCAGACAGAAGA 1044
Query 115180 CGATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTA 115239
||||| || ||| | || || || |||| | || ||||||| || ||||||||
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 115240 CACGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCT 115299
|| | || || || | ||||||| || ||| || || || || ||
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 115300 TCAATTGTATTTTGAGATGGTTTGTTTTTTAACATG-TTGAATA--ATTCAACCGCAAAT 115356
| || | || | ||||| | | | ||| || |||| | ||| || ||
Sbjct 923 TGGATCCTCTTCTCTTCCGGTTT-TGCAATGATATGCTTAAATAGGAGGCAA--GCGAAA 867
Query 115357 TCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGT 115416
|| |||| || |||||||||||||| || ||||| || || | || || |
Sbjct 866 TCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATA 807
Query 115417 AACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCA 115476
| || | |||||| | |||||| || || ||| || || |||||||| | ||||||
Sbjct 806 AGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTCT 747
Query 115477 ACACACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTAT---CAAACCACTTC 115533
||| ||||| ||| | |||||||| ||||| || ||| ||| ||| |
Sbjct 746 ACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCAGTCG 687
Query 115534 ATAGCCCATTTCGCCTTTCTT 115554
| |||||||| ||||||| ||
Sbjct 686 AGAGCCCATTGCGCCTTTTTT 666
>seq75644
Length=2520
Score = 105 bits (116), Expect = 8e-18
Identities = 107/137 (78%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122
|| || || || ||||| ||||| |||||||||||||| |||| || ||||||||||||
Sbjct 590 TATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATTCTCCATA 649
Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCA-CTTGTTTTGATAATCG 115181
|||||||||||||| | | ||||| || || | || ||| | || || | | || ||
Sbjct 650 AAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG-CAAGCG 708
Query 115182 ATCCGCAACATATTCGA 115198
||| |||||| ||||||
Sbjct 709 ATCGGCAACAAATTCGA 725
>seq110960
Length=1818
Score = 96.9 bits (106), Expect = 4e-15
Identities = 105/137 (77%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 115063 TAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCATA 115122
|| || || || ||||| ||||| ||||| |||||||| |||| || ||||||||||||
Sbjct 1229 TATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATTCTCCATA 1170
Query 115123 AAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCA-CTTGTTTTGATAATCG 115181
|||||||||||||| | | ||||| || || | || ||| | || || | || ||
Sbjct 1169 AAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG-CAAGCG 1111
Query 115182 ATCCGCAACATATTCGA 115198
||| |||||| ||||||
Sbjct 1110 ATCGGCAACAAATTCGA 1094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632620865654320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |