Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 84.2 3e-11
>seq93010
Length=2134
Score = 84.2 bits (92), Expect = 3e-11
Identities = 353/549 (64%), Gaps = 9/549 (2%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| | ||| | ||| | ||| | || ||||| || || || || || | ||
Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCAGTC 279
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730
| || || ||| || ||||||| || || || | ||||| | || || |||||
Sbjct 280 TGTGAAACCTACAACTTGATGTCCT-TGAAGTGGTTTACTCACGCTTCCCCCACTCTCTT 338
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
|| ||||||||||||| ||||| |||||||| ||||| ||| | ||| ||||| ||
Sbjct 339 TAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGATGA 398
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | |||||||| | || ||| ||||||||| || || || | |||||
Sbjct 399 CAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCTGG 458
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAA 111909
||||| || | | | ||| | | | | || || | |||| ||||| |
Sbjct 459 GGGTATTGGTGTAAATGTTCATTGCATACGCGGC-ACTGGTACCTATATTGCTGGTACGA 517
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
||||| | || |||| || | |||||| | || || |||||| || || ||||| |
Sbjct 518 ATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCTCGCTACG 577
Query 111970 TAAACCAAGCTGGGCGTCGCAAG---GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026
| | || | ||| | | | || | | || ||||||| |||||||||||
Sbjct 578 TCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCATGGCATA 637
Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085
|||| || | ||| | || || || ||| |||| || |||| | ||||
Sbjct 638 CGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAGAGGTTC-GTGCT 696
Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145
| ||||| || | || || ||||| || ||||| || ||| | ||||||| | |
Sbjct 697 AGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTGTTGAGGCTAAT 756
Query 112146 GGCAATTGG 112154
||| | |||
Sbjct 757 GGCGACTGG 765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618287379326560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |