Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq93010 84.2 3e-11 >seq93010 Length=2134 Score = 84.2 bits (92), Expect = 3e-11 Identities = 353/549 (64%), Gaps = 9/549 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| | ||| | ||| | || ||||| || || || || || | || Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCAGTC 279 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATG-TTCATCCACGCAACACCAACCCTCTT 111730 | || || ||| || ||||||| || || || | ||||| | || || ||||| Sbjct 280 TGTGAAACCTACAACTTGATGTCCT-TGAAGTGGTTTACTCACGCTTCCCCCACTCTCTT 338 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || ||||||||||||| ||||| |||||||| ||||| ||| | ||| ||||| || Sbjct 339 TAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGATGA 398 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | |||||||| | || ||| ||||||||| || || || | ||||| Sbjct 399 CAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCTGG 458 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAA 111909 ||||| || | | | ||| | | | | || || | |||| ||||| | Sbjct 459 GGGTATTGGTGTAAATGTTCATTGCATACGCGGC-ACTGGTACCTATATTGCTGGTACGA 517 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 ||||| | || |||| || | |||||| | || || |||||| || || ||||| | Sbjct 518 ATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCTCGCTACG 577 Query 111970 TAAACCAAGCTGGGCGTCGCAAG---GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 | | || | ||| | | | || | | || ||||||| ||||||||||| Sbjct 578 TCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCATGGCATA 637 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC- 112085 |||| || | ||| | || || || ||| |||| || |||| | |||| Sbjct 638 CGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAGAGGTTC-GTGCT 696 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 | ||||| || | || || ||||| || ||||| || ||| | ||||||| | | Sbjct 697 AGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTGTTGAGGCTAAT 756 Query 112146 GGCAATTGG 112154 ||| | ||| Sbjct 757 GGCGACTGG 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618287379326560